]> Scans DNA sequences for transcription factors (EMBOSS) nucleic:transcription http://bioweb.pasteur.fr/docs/EMBOSS/tfscan.html tfscan &emboss_init; input Input section sequence sequence -- DNA [sequences] (-sequence) perl " -sequence=$value -sformat=fasta" 1 dna 8 seqsfile perl 1 required Required section menu Select class -- Transcription Factor Class (-menu) F fungi I insect P plant V vertebrate O other C Custom V perl " -menu=$value" 2 custom Name of data file (-custom) acd @($(menu)==C) perl " -custom=$value" 3 mismatch Number of mismatches (-mismatch) 0 perl " -mismatch=$value" 4 advanced Advanced section minlength Display matches equal to or above this length (-minlength) 1 perl (defined $value && $value != $vdef)? " -minlength=$value" : "" 5 1 output Output section outfile outfile (-outfile) outfile.out perl " -outfile=$value" 6 auto perl " -auto -stdout" 7