1.2.2 construction of phylogenetic trees of DNA sequences using maximum likelihood Olsen, Matsuda, Hagstrom, Overbeek Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R. 1994. fastDNAml: A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput. Appl. Biosci. 10: 41-48. Felsenstein, J. 1981. Evolutionary trees from DNA sequences: A maximum likelihood approach. J. Mol. Evol. 17: 368-376. fastdnamlpar fastdnamlpar perl "fastdnamlpar" 1000 alignment Sequence Alignment File perl " $value" 1001 The input to fastDNAml is similar to that used by DNAML (and the other PHYLIP programs). 12 readseq_ok_alig perl fastDNAml results *.bst *.cpt *.trf