# src/main/resources/core/ngbw.cfg.xml
tool.registry.home=cipres

# ###################################################################################
# running sge jobs
# directory must be owned by userid running the web application
#directory must be accessible from cipres cluster and the web server 
# ###################################################################################
# src/main/resources/tool/cipres/tool-registry.cfg.xml:
tool.resource.cluster=CIPRES_CLUSTER
# src/main/resources/tool/cipres/tool-registry.cfg.xml, workspace for SGE jobs on CIPRES_CLUSTER
workspace.cluster=/archive/science/ngbt/portal2test/workspace/sge_jobs/


# ####################################################################################
# running non-sge jobs
# directory must be owned by "bwbatch"
# ####################################################################################
# for tools running with RunServiceApp(): paup, recidcm3-paup, recidcm3-raxml
tool.resource.host=8BALL
host=8ball
# src/main/resources/tool/cipres/tool-registry.cfg.xml, workspace for non-SGE jobs 
workspace=/archive/science/ngbt/portal2test/workspace/bwbatch_jobs/

# ####################################################################################
# GLOBUS  Teragrid Properties 
#  Add teragrid.username and teragrid.password to ~/.m2/settings.xml.  Username and
#  password are for the teragrid user portal account.
#
# grid.globus.dir is set in pom.xml because it is used there.
# ####################################################################################

# Referenced in tool-registry.xml:
teragrid.lonestar.workspace=/home/01143/tg804218/ngbw/workspace
teragrid.lonestar.wrapper=/home/01143/tg804218/ngbw/contrib/tools/bin/wrap.sh

# Set to "true" to disable teragrid tools, "false" to enable teragrid tools.  
teragrid.tools.disable=false


# The rest of the teragrid properties are referenced by globus.properties.  

# The identity we put in our teragrid security credentials. 
gridshib.entity.id=www.phylo.org/portal2
gridshib.domain=www.phylo.org

# Units for the following are in minutes (1 hr=60, 1 day = 1440, 3 days = 4320, 7 days = 10080, etc)
# The longest proxy we can get from myproxy with our current credential is 7 days so
# there's no point trying to run jobs longer than that.  Lonestar only allows 2 days anyway.

# Globus process worker exits after this much time.  Should be longer than any job will take.
grid.job.lifetime.max = 10080 

# Globus process worker polls very frequently the first minute, then at quick.poll.interval for 
# several minutes and finally at poll.interval.
grid.job.poll.interval = 1 
grid.job.quick.poll.interval = 5 

# Lifetime of credential in hours.  min.lifetime  must be less than lifetime.
# With the credential we're using (a default teragrid credential) 7 days = 168 hrs is the max
# we can get. 
grid.myproxy.lifetime = 168 
grid.myproxy.min.lifetime = 144 


# ####################################################################################
# END GLOBUS  Teragrid Properties 
# ####################################################################################


# ####################################################################################
# Used for sending job completion email 
# /src/main/resources/tool/[job-html.ftl, job-text.ftl, spring-mail.xml]
# ####################################################################################
portal.url=http://8ball.sdsc.edu:7070/portal2
portal.name=Cipres Portal Test
job.email.from=Cipres Web Portal <customerservice@phylo.org>
job.email.enable=true

# ####################################################################################
# Database connection info that will be used in resource filtering of  
#    /src/main/resources/database/database.properties 
# See Readme.txt for explanation of why database.username and database.password
# aren't here. 
# ####################################################################################
database.url=jdbc:mysql://mysql.sdsc.edu:3312/ngbwtest
database.maxPoolSize=15
database.minPoolSize=3
database.debugUnreturnedConnectionStackTraces=true
database.unreturnedConnectionTimeout=120

process_worker_command=process_worker_run
# process_worker_logs should be the same directory as ngbw.logs!
process_worker_logs=/archive/science/ngbt/portal2test/logs/