#!/bin/sh

# Can't run module command (I think it's a bash fn) without sourcing bashrc
source $HOME/.bashrc

module load mafft

echo "CIPRES_THREADSPP=$CIPRES_THREADSPP" 1>&2
echo "CIPRES_NP=$CIPRES_NP" 1>&2
echo "running:" 1>&2
echo "mafft-linsi $*" 1>&2


mafft-linsi $*