// UniprotParser.hpp


#if !defined(UNIPROT_PARSER_HPP)
#define UNIPROT_PARSER_HPP


#include <string>
#include "Parser.hpp"
#include "Reader.hpp"


namespace NGBW {


struct UniprotRecord {

	void clear() throw()
	{
		identity.clear();
		accession.clear();
		description.clear();
		organism.clear();
		version.clear();
		sequence.clear();
	}

	std::string identity;
	std::string accession;
	std::string description;
	std::string organism;
	std::string version;
	std::string sequence;
};


class UniprotParser : public Parser {
public:

	UniprotParser(Reader &input) throw() : Parser(input) { }
	~UniprotParser() throw() { }


	bool Parse(UniprotRecord &record);


private:

	void ParseIdentity(UniprotRecord &record);
	void ParseAccession(UniprotRecord &record);
	void ParseDate(UniprotRecord &record);
	void ParseDescription(UniprotRecord &record);
	void ParseOrganism(UniprotRecord &record);
	void ParseSequence(UniprotRecord &record);
	bool FindEndToken();
};


} // namespace NGBW


#endif // UNIPROT_PARSER_HPP