hmmpfam - search one or more sequences against HMM database HMMER 2.2g (August 2001) Copyright (C) 1992-2001 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /fdb/fastadb/pfam/Pfam_fs Sequence file: /home/susanc/hmmer/Artemia.fa PVM: ACTIVE - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: S13421 Accession: [none] Description: S13421 GLOBIN - BRINE SHRIMP Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- globin Globin 866.1 7.1e-258 9 DUF191 Uncharacterized ACR, COG2107 4.1 0.23 1 FliD Flagellar hook-associated protein 2 1.5 0.49 1 Flu_B_NS1 Influenza B non-structural protein (N 2.5 0.66 1 OMPdecase Orotidine 5'-phosphate decarboxylase 2.3 0.7 1 ACOX Acyl-CoA oxidase 2.8 1.1 1 Adeno_Penton_B Adenovirus penton base protein -0.5 1.2 1 AIRS_C AIR synthase related protein, C-termi 2.1 1.4 1 Glyco_hydro_25 Glycosyl hydrolases family 25 2.6 1.8 1 SBP_bacterial_1 Bacterial extracellular solute-bindin 0.2 1.8 1 DUF78 Protein of unknown function DUF78 2.4 1.9 1 PRTP Herpesvirus processing and transport 0.5 2.2 1 TLC TLC ATP/ADP transporter -0.6 2.7 1 FAR1 FAR1 family 0.7 2.8 1 5_nucleotidaseC 5'-nucleotidase, C-terminal domain 0.8 2.9 1 UCR_TM Ubiquinol cytochrome reductase transm 1.3 3 1 WHEP-TRS WHEP-TRS domain 1.6 3.1 1 TRAM TRAM domain 2.1 3.3 1 RNA_pol DNA-dependent RNA polymerase -0.4 3.4 1 Glyco_hydro_20 Glycosyl hydrolase family 20, catalyt -0.3 3.4 1 NB-ARC NB-ARC domain -0.5 3.6 1 cNMP_binding Cyclic nucleotide-binding domain 1.2 3.7 1 VHP Villin headpiece domain 1.6 3.8 1 MadM Malonate/sodium symporter MadM subuni 1.5 3.8 1 DUF186 GatB/Yqey domain 0.6 4.2 1 DUF227 Domain of unknown function (DUF227) -0.3 4.2 1 Bcl-2 Apoptosis regulator proteins, Bcl-2 f -0.9 4.6 1 Methyltransf_4 Putative methyltransferase -1.2 5.1 1 jmjC jmjC domain 0.3 5.4 1 Enhancin Viral enhancin protein -2.2 5.7 1 Flavodoxin_2 Flavodoxin-like fold -0.6 6.1 1 Phycobilisome Phycobilisome protein -0.3 6.1 1 Glucan_synthase 1,3-beta-glucan synthase component -3.4 6.2 1 Sigma_1_2 Reoviral Sigma1/Sigma2 family -2.0 6.2 1 FokI_C Restriction endonuclease FokI, cataly -1.3 6.5 1 gla Vitamin K-dependent carboxylation/gam 0.7 7.5 1 Glutaminyl_cycl Glutaminyl cyclase -2.3 8.2 1 Neurokinin_B Neurokinin B -0.4 8.5 1 FecCD FecCD transport family -1.3 8.6 1 Macscav_rec Macrophage scavenger receptor 0.6 9 2 Ribosomal_S14 Ribosomal protein S14p/S29e -0.6 9.5 1 BcsB Bacterial cellulose synthase subunit -2.6 9.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- globin 1/9 1 139 [. 6 158 .] 78.2 2.3e-22 BcsB 1/1 68 86 .. 643 661 .] -2.6 9.6 WHEP-TRS 1/1 76 85 .. 26 35 .. 1.6 3.1 Enhancin 1/1 81 109 .. 800 830 .] -2.2 5.7 DUF186 1/1 105 126 .. 1 24 [. 0.6 4.2 MadM 1/1 127 135 .. 1 9 [. 1.5 3.8 globin 2/9 149 293 .. 1 158 [] 100.4 1e-28 Glyco_hydro_25 1/1 244 255 .. 1 12 [. 2.6 1.8 Macscav_rec 1/2 249 259 .. 17 27 .. 0.2 11 Glucan_synthase 1/1 254 266 .. 60 72 .. -3.4 6.2 Glutaminyl_cycl 1/1 256 266 .. 528 538 .] -2.3 8.2 SBP_bacterial_1 1/1 269 286 .. 1 15 [. 0.2 1.8 Ribosomal_S14 1/1 270 277 .. 95 102 .] -0.6 9.5 globin 3/9 303 450 .. 1 158 [] 138.0 1.7e-39 TRAM 1/1 406 424 .. 27 50 .. 2.1 3.3 PRTP 1/1 455 468 .. 694 707 .] 0.5 2.2 globin 4/9 460 607 .. 1 158 [] 88.3 3.1e-25 Neurokinin_B 1/1 474 496 .. 37 59 .] -0.4 8.5 cNMP_binding 1/1 478 497 .. 101 120 .] 1.2 3.7 RNA_pol 1/1 536 547 .. 553 564 .] -0.4 3.4 FAR1 1/1 583 599 .. 217 233 .] 0.7 2.8 gla 1/1 589 596 .. 35 42 .] 0.7 7.5 globin 5/9 619 762 .. 1 158 [] 75.5 1.4e-21 ACOX 1/1 657 689 .. 109 143 .] 2.8 1.1 AIRS_C 1/1 692 706 .. 166 180 .] 2.1 1.4 FecCD 1/1 702 708 .. 305 311 .] -1.3 8.6 DUF191 1/1 726 757 .. 235 268 .] 4.1 0.23 globin 6/9 771 885 .. 1 123 [. 84.1 4.8e-24 jmjC 1/1 818 830 .. 114 126 .] 0.3 5.4 DUF227 1/1 852 863 .. 236 247 .] -0.3 4.2 VHP 1/1 864 880 .. 7 23 .. 1.6 3.8 Sigma_1_2 1/1 870 882 .. 1 13 [. -2.0 6.2 NB-ARC 1/1 907 923 .. 335 351 .] -0.5 3.6 globin 7/9 928 1075 .. 1 158 [] 116.5 2.5e-33 Flu_B_NS1 1/1 952 963 .. 236 247 .] 2.5 0.66 UCR_TM 1/1 965 978 .. 1 19 [. 1.3 3 OMPdecase 1/1 1014 1043 .. 28 64 .. 2.3 0.7 DUF78 1/1 1020 1030 .. 1 11 [. 2.4 1.9 FokI_C 1/1 1039 1054 .. 22 37 .. -1.3 6.5 Glyco_hydro_20 1/1 1049 1063 .. 442 456 .] -0.3 3.4 5_nucleotidaseC 1/1 1065 1090 .. 196 234 .] 0.8 2.9 globin 8/9 1085 1234 .. 1 158 [] 99.4 2e-28 Methyltransf_4 1/1 1108 1120 .. 242 254 .] -1.2 5.1 Phycobilisome 1/1 1157 1165 .. 163 171 .] -0.3 6.1 Bcl-2 1/1 1174 1198 .. 1 20 [. -0.9 4.6 TLC 1/1 1184 1207 .. 1 24 [. -0.6 2.7 Flavodoxin_2 1/1 1204 1227 .. 198 221 .] -0.6 6.1 globin 9/9 1244 1390 .. 1 158 [] 85.7 1.6e-24 Adeno_Penton_B 1/1 1277 1288 .. 427 438 .. -0.5 1.2 Macscav_rec 2/2 1309 1323 .. 35 49 .] 0.4 10 FliD 1/1 1310 1322 .. 726 738 .] 1.5 0.49 Alignments of top-scoring domains: globin: domain 1 of 9, from 1 to 139: score 78.2, E = 2.3e-22 *->qkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpkfgdls +ka +k +W+ v + +++ +G+ ++ +F+a P++k++F f ++ S13421 1 DKATIKRTWATV-T--DLPSFGRNVFLSVFAAKPEYKNLFVEF-RNI 43 dlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkkLadrHa ++ +l++s+++ Hg++Vl++++ea++ + d ++ + +l L++rH+ S13421 44 PASELASSERLLYHGGRVLSSIDEAIAGI---DTPDRAVKTLLALGERHI 90 ergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdkaldvvada +rg +F+ f+ a+++ L+ + + ++ aAW + +d+++ + S13421 91 SRG--TVRRHFEAFSYAFIDELKQRGVES-----ADLAAWRRGWDNIVNV 133 lksgyr<-* l +g+ S13421 134 LEAGLL 139 BcsB: domain 1 of 1, from 68 to 86: score -2.6, E = 9.6 *->amieaeSPynsqRtvlAll<-* a +++ +P ++ t+lAl+ S13421 68 AIAGIDTPDRAVKTLLALG 86 WHEP-TRS: domain 1 of 1, from 76 to 85: score 1.6, E = 3.1 *->DaAVkkLLaL<-* D AVk+LLaL S13421 76 DRAVKTLLAL 85 Enhancin: domain 1 of 1, from 81 to 109: score -2.2, E = 5.7 *->lLlnlailtIanglnrdsanyddssYvgvel<-* +Ll+l+ I +g++r+++ + sY+ ++ S13421 81 TLLALGERHISRGTVRRHF--EAFSYAFIDE 109 DUF186: domain 1 of 1, from 105 to 126: score 0.6, E = 4.2 *->dlfeelvkamkgkdpkkaanWlmv<-* + +el++ +g++ +a+W+ + S13421 105 AFIDELKQ--RGVESADLAAWRRG 126 MadM: domain 1 of 1, from 127 to 135: score 1.5, E = 3.8 *->weilvkvLt<-* w+ +v+vL+ S13421 127 WDNIVNVLE 135 globin: domain 2 of 9, from 149 to 293: score 100.4, E = 1e-28 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk gLs+ ++a ++ sW+kv+g ++ G+ +++r+ +P+++ +F + S13421 149 GLSCVDVANIQESWSKVSG--DLKTTGSVVFQRMINGHPEYQQLFRQ 193 fgdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkkL f ++dl+ l s f aH +V+aa++ ++ +L d+++ ++++lkkL S13421 194 F-RDVDLDKLGESNSFVAHVFRVVAAFDGIIHEL--DNNQ-FIVSTLKKL 239 adrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdkald +++H++rg d +F+ f+ ll++L+e ++ ++ka+W+ka+d S13421 240 GEQHIARG--TDISHFQNFRVTLLEYLKENG-----MNGAQKASWNKAFD 282 vvadalksgyr<-* + ++ g+ S13421 283 AFEKYISMGLS 293 Glyco_hydro_25: domain 1 of 1, from 244 to 255: score 2.6, E = 1.8 *->svlGiDVSsyQg<-* + +G D+S++Q+ S13421 244 IARGTDISHFQN 255 Macscav_rec: domain 1 of 2, from 249 to 259: score 0.2, E = 11 *->DserFQNFSvt<-* D +FQNF vt S13421 249 DISHFQNFRVT 259 Glucan_synthase: domain 1 of 1, from 254 to 266: score -3.4, E = 6.2 *->qlsrvTlLeYLKq<-* q+ rvTlLeYLK+ S13421 254 QNFRVTLLEYLKE 266 Glutaminyl_cycl: domain 1 of 1, from 256 to 266: score -2.3, E = 8.2 *->lqvFvleyLkl<-* ++v++leyLk S13421 256 FRVTLLEYLKE 266 SBP_bacterial_1: domain 1 of 1, from 269 to 286: score 0.2, E = 1.8 *->t.g.e.dalkelvaeFek<-* ++g +++ + +++++Fek S13421 269 MnGaQkASWNKAFDAFEK 286 Ribosomal_S14: domain 1 of 1, from 270 to 277: score -0.6, E = 9.5 *->pGvkKaSW<-* +G KaSW S13421 270 NGAQKASW 277 globin: domain 3 of 9, from 303 to 450: score 138.0, E = 1.7e-39 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk gLs +k +++++Wgkv+g n++e+G++ +++lF+a+P+++ +F S13421 303 GLSGLEKNAILSTWGKVRG--NLQEVGKATFGKLFTAHPEYQQMFR- 346 f.gdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkk f+ ++ la+l spkf+aH ++V++al++ + +L + + ++++++k+ S13421 347 FsQGMP-LASLVESPKFAAHTQRVVSALDQTLLAL---NRPSDFVYMIKE 392 LadrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdkal L+ +H++rg d +F+ +++++L+e lg+ ++++++ +++++++ S13421 393 LGLDHINRG--TDRSHFENYQVVFIEYLKETLGD--SLDEFTVKSFNHVF 438 dvvadalksgyr<-* v+++ l g+r S13421 439 EVIISFLNEGLR 450 TRAM: domain 1 of 1, from 406 to 424: score 2.1, E = 3.3 *->rtengkvVfvpgaklkrlprlIGe<-* ++en++vVf++ l++++G+ S13421 406 HFENYQVVFIEY-----LKETLGD 424 PRTP: domain 1 of 1, from 455 to 468: score 0.5, E = 2.2 *->FegvdglndtQkea<-* +++v++l++ Qke+ S13421 455 VDPVTHLTGRQKEM 468 globin: domain 4 of 9, from 460 to 607: score 88.3, E = 3.1e-25 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyF.. +L+ qk+ +kasW+k+++ ++ lG+e++ r+Fka+P+++t+F + S13421 460 HLTGRQKEMIKASWSKART--DLRSLGQELFMRMFKAHPEYQTLFvn 504 pkfgdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalk ++f+d ++l +l +++f H++ Vl++++ ++ +L d + + l+ S13421 505 KGFAD-VPLVSLREDERFISHMANVLGGFDTLLQNL---DESSYFIYSLR 550 kLadrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdka L+d H++r+ + +F+ f+++l+ L+e ++++ +AW k+ S13421 551 NLGDAHIQRK--AGTQHFRSFEAILIPILQESQ----GLDAASVEAWKKF 594 ldvvadalksgyr<-* +dv ++++++g++ S13421 595 FDVSIGVIAQGLK 607 Neurokinin_B: domain 1 of 1, from 474 to 496: score -0.4, E = 8.5 *->skkDsdLYqLPPslLrRLydsrs<-* sk dL L l R++++++ S13421 474 SKARTDLRSLGQELFMRMFKAHP 496 cNMP_binding: domain 1 of 1, from 478 to 497: score 1.2, E = 3.7 *->sellrldredFrrllqkype<-* ++l +l++e F+r+ +pe S13421 478 TDLRSLGQELFMRMFKAHPE 497 RNA_pol: domain 1 of 1, from 536 to 547: score -0.4, E = 3.4 *->lkeileSdYffn<-* l+++ eS+Yf++ S13421 536 LQNLDESSYFIY 547 FAR1: domain 1 of 1, from 583 to 599: score 0.7, E = 2.8 *->aDAksivdYthFgDvvt<-* +DA s+++ ++F+Dv + S13421 583 LDAASVEAWKKFFDVSI 599 gla: domain 1 of 1, from 589 to 596: score 0.7, E = 7.5 *->efyrkYyg<-* e+++k+++ S13421 589 EAWKKFFD 596 globin: domain 5 of 9, from 619 to 762: score 75.5, E = 1.4e-21 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk gL +++ ++++ ++ v + + +e+G+ ++a+lF+a+P++k++F+k S13421 619 GLYGKEIVALRQAFAAVTP--RNVEIGKRVFAKLFAAHPEYKNLFKK 663 fgdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkkL f + ++ ++l+++++f+ H V++ ++ + k + dd ++++lkkL S13421 664 F-EQYSVEELPSTDAFHYHISLVMNRFSSIGKVI---DDNVSFVYLLKKL 709 adrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdkald ++ H++rg + ++F++f e ++ +++ l++ + ++k+l+ S13421 710 GREHIKRG--LSRKQFDQFVELYIAEISSELSD------TGRNGLEKVLT 751 vvadalksgyr<-* +++ +g+ S13421 752 FATGVIEQGLF 762 ACOX: domain 1 of 1, from 657 to 689: score 2.8, E = 1.1 *->YenlFeevkqqnPlnntrevkPsYekaLkpmlnra<-* Y+nlF+++ q+ +++ ++++ +++ ++nr S13421 657 YKNLFKKFE-QYSVEEL-PSTDAFHYHISLVMNRF 689 AIRS_C: domain 1 of 1, from 692 to 706: score 2.1, E = 1.4 *->IGevtaeqkvfvivk<-* IG+v++++ fv+++ S13421 692 IGKVIDDNVSFVYLL 706 FecCD: domain 1 of 1, from 702 to 708: score -1.3, E = 8.6 *->FlYLLrr<-* F+YLL++ S13421 702 FVYLLKK 708 DUF191: domain 1 of 1, from 726 to 757: score 4.1, E = 0.23 *->FistYvNeeTfnLSevgrkAlkkLwelgeecgli<-* F+ +Y+ e + LS +gr l k ++ + g i S13421 726 FVELYIAEISSELSDTGRNGLEKVLTF--ATGVI 757 globin: domain 6 of 9, from 771 to 885: score 84.1, E = 4.8e-24 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk L+a +k+ ++++W+ +++t +++l ++i++rlF a+P++k +F + S13421 771 TLTALEKQSIQDIWSNLRST-GLQDLAVKIFTRLFSAHPEYKLLFTG 816 f.gdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkk g+ + +++ ++ fkaH +Vl+a++ ++++L dd + l +lk+ S13421 817 RfGN-V--DNINENAPFKAHLHRVLSAFDIVISTL---DDSEHLIRQLKD 860 LadrHaergvhvdpanFklfgeallvv<-* L+ H + g ++ +F+ f++a+l v S13421 861 LGLFHTRLG--MTRSHFDNFATAFLSV 885 jmjC: domain 1 of 1, from 818 to 830: score 0.3, E = 5.4 *->fNlGfniaeavNF<-* f++ +ni+e+ F S13421 818 FGNVDNINENAPF 830 DUF227: domain 1 of 1, from 852 to 863: score -0.3, E = 4.2 *->eaLvetLkkLny<-* e+L++ Lk+L+ S13421 852 EHLIRQLKDLGL 863 VHP: domain 1 of 1, from 864 to 880: score 1.6, E = 3.8 *->FeevFgMtkeEFykLPl<-* F ++ gMt++ F++ ++ S13421 864 FHTRLGMTRSHFDNFAT 880 Sigma_1_2: domain 1 of 1, from 870 to 882: score -2.0, E = 6.2 *->MARAvydFfTtlF<-* M R ++d f t F S13421 870 MTRSHFDNFATAF 882 NB-ARC: domain 1 of 1, from 907 to 923: score -0.5, E = 3.6 *->qlislWiaegfvtesne<-* +l++++i eg+++ +++ S13421 907 KLMHGVIEEGLLQLERI 923 globin: domain 7 of 9, from 928 to 1075: score 116.5, E = 2.5e-33 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk gLsa ++a vk++W vk+ +++ +G i++ lF+a+P++++ Fpk S13421 928 GLSAREVAVVKQTWNLVKP--DLMGVGMRIFKSLFEAFPAYQAVFPK 972 fgdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkkL f+d ++l+ l ++p++ +H+ V+ l+e++ +L d ++nl+ ++++L S13421 973 FSD-VPLDKLEDTPAVGKHSISVTTKLDELIQTL---DEPANLALLARQL 1018 adrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdkald +++H+ v + Fk fg++l+ L++ lg+ f+ ++ +W+ka+d S13421 1019 GEDHIVLR--VNKPMFKSFGKVLVRLLENDLGQ--RFSSFASRSWHKAYD 1064 vvadalksgyr<-* v++ + g++ S13421 1065 VIVEYIEEGLQ 1075 Flu_B_NS1: domain 1 of 1, from 952 to 963: score 2.5, E = 0.66 *->GHRiLnsLFERf<-* G Ri sLFE f S13421 952 GMRIFKSLFEAF 963 UCR_TM: domain 1 of 1, from 965 to 978: score 1.3, E = 3 *->AhTDvPevPDfSeLSSVPL<-* A+ +v +P fS VPL S13421 965 AYQAV--FPKFSD---VPL 978 OMPdecase: domain 1 of 1, from 1014 to 1043: score 2.3, E = 0.7 *->ladelgpeyvdvlKvGtplfedfGseGttllklvael<-* la++lg+ + vl v+ p+f++fG + lv++l S13421 1014 LARQLGE-DHIVLRVNKPMFKSFG------KVLVRLL 1043 DUF78: domain 1 of 1, from 1020 to 1030: score 2.4, E = 1.9 *->eenvVliGkKP<-* e+++Vl+ +KP S13421 1020 EDHIVLRVNKP 1030 FokI_C: domain 1 of 1, from 1039 to 1054: score -1.3, E = 6.5 *->llrLLedqPskqlsKF<-* l+rLLe+ ++++s F S13421 1039 LVRLLENDLGQRFSSF 1054 Glyco_hydro_20: domain 1 of 1, from 1049 to 1063: score -0.3, E = 3.4 *->PRasAvAERlWSkks<-* +R s +A R W+k+ S13421 1049 QRFSSFASRSWHKAY 1063 5_nucleotidaseC: domain 1 of 1, from 1065 to 1090: score 0.8, E = 2.9 *->vtnsYlanGlgDGytmikeldskpkyFpaledtgrlDae<-* v +Y+ +Gl s++++ + tg++Dae S13421 1065 VIVEYIEEGL---------QQSYKQD----PVTGITDAE 1090 globin: domain 8 of 9, from 1085 to 1234: score 99.4, E = 2e-28 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk g ++a+kalv+ sW+ +k+ ++ lG++i++++F+++Pd++ +F + S13421 1085 GITDAEKALVQESWDLLKP--DLLGLGRKIFTKVFTKHPDYQILFTR 1129 ..fgdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalk ++fgd ++l l ++p+f H kV+ a+++++ L + +++l a+l+ S13421 1130 tgFGD-TPLTKLDDNPAFGTHIIKVMRAFDHVIQIL---GKPKTLMAYLR 1175 kLadrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdka +++H++ + v +F+ f++al+ v+++ l + p++ aAW k S13421 1176 SVGADHIATN--VERRHFQAFSNALIPVMQHDLKA--QLRPDAVAAWRKG 1221 ldvvadalksgyr<-* ld +++ + +g+ S13421 1222 LDRIIGIIDQGLI 1234 Methyltransf_4: domain 1 of 1, from 1108 to 1120: score -1.2, E = 5.1 *->lggpifeliFkkl<-* lg++if +F k+ S13421 1108 LGRKIFTKVFTKH 1120 Phycobilisome: domain 1 of 1, from 1157 to 1165: score -0.3, E = 6.1 *->FDyaisals<-* FD++i+ l+ S13421 1157 FDHVIQILG 1165 Bcl-2: domain 1 of 1, from 1174 to 1198: score -0.9, E = 4.6 *->LrraGde.....lekrveraFssms<-* Lr++G+++ +++e+r+ +aFs+++ S13421 1174 LRSVGADhiatnVERRHFQAFSNAL 1198 TLC: domain 1 of 1, from 1184 to 1207: score -0.6, E = 2.7 *->tskeekffsKlraiiWPIeryELk<-* t e+ +f +++ ++ P+ ++ Lk S13421 1184 TNVERRHFQAFSNALIPVMQHDLK 1207 Flavodoxin_2: domain 1 of 1, from 1204 to 1227: score -0.6, E = 6.1 *->daisdearaayleryrarlkallg<-* + +++ r + ++++r l++++g S13421 1204 HDLKAQLRPDAVAAWRKGLDRIIG 1227 globin: domain 9 of 9, from 1244 to 1390: score 85.7, E = 1.6e-24 *->gLsaaqkalvkasWgkvkgtdnreelGaeilarlFkayPdtktyFpk ++sa ++++v+ +W+ +k+ +++ Ga +++ lF+ + ++ +F+ S13421 1244 AFSAYDIQAVQRTWALAKP--DLMGKGAMVFKQLFTDH-GYQPLFSN 1287 fgdlsdlaalkgspkfkaHgkkVlaalgeavkhLgnddddgnlkaalkkL ++ + + l gsp++ H+ V+a l+ +v +L + l + l++L S13421 1288 LAQ-YEITGLEGSPELNTHARNVMAQLDTLVGSL---QNSIELGQSLAQL 1333 adrHaergvhvdpanFklfgeallvvLaehlggevdftpevkaAWdkald +++H+ r+ v ++Fk f+e+++ +++ lg+ +ftp + AW +a+d S13421 1334 GKDHVPRK--VNRVHFKDFAEHFIPLMKADLGD--EFTPLAESAWKRAFD 1379 vvadalksgyr<-* v+++ + +g S13421 1380 VMIATIEQGQE 1390 Adeno_Penton_B: domain 1 of 1, from 1277 to 1288: score -0.5, E = 1.2 *->tDHGtlPLkNsL<-* tDHG +PL+++L S13421 1277 TDHGYQPLFSNL 1288 Macscav_rec: domain 2 of 2, from 1309 to 1323: score 0.4, E = 10 *->VLLQLnsLissvqeh<-* V+ QL +L+ s+q S13421 1309 VMAQLDTLVGSLQNS 1323 FliD: domain 1 of 1, from 1310 to 1322: score 1.5, E = 0.49 *->FtamDtlmgkmne<-* + ++Dtl+g++++ S13421 1310 MAQLDTLVGSLQN 1322 //