BLASTP 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
Database: C:\bio_tools\blast_data\ProteinBlastDB
           103 sequences; 26,463 total letters

Searching

Query= Hallo
         (330 letters)



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3                                                                     666   0.0
99                                                                     22   1.8
96                                                                     19   9.0
78                                                                     19   9.0

>3
          Length = 330

 Score =  666 bits (1719), Expect = 0.0
 Identities = 320/330 (96%), Positives = 320/330 (96%)

Query: 1   MKTQIGYFASLEQYRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAA 60
           MKTQIGYFASLEQYRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAA
Sbjct: 1   MKTQIGYFASLEQYRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAA 60

Query: 61  LQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRXXXXXXXXXXMNEVPVTGEWP 120
           LQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGR          MNEVPVTGEWP
Sbjct: 61  LQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWP 120

Query: 121 SVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGA 180
           SVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGA
Sbjct: 121 SVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGA 180

Query: 181 KLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAV 240
           KLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAV
Sbjct: 181 KLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAV 240

Query: 241 EALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEA 300
           EALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEA
Sbjct: 241 EALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEA 300

Query: 301 GINHFCLGNSSPDVNFGIDIFKEVIPAVRD 330
           GINHFCLGNSSPDVNFGIDIFKEVIPAVRD
Sbjct: 301 GINHFCLGNSSPDVNFGIDIFKEVIPAVRD 330


>99
          Length = 607

 Score = 21.6 bits (44), Expect = 1.8
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 18/99 (18%)

Query: 27  EKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVA 86
           E +G +  W  D+ + W  D A   +A + +G    ATK              Y+   +
Sbjct: 268 EIIGGERNW--DYRYTWIRDTAYVVEALSLIGLNDVATK------------FLYDIMSIV 313

Query: 87  QTFATLRQMYPGRXXXXXXXXXXMNEVPVTGEWPSVPVR 125
           Q    ++ +YP              +V ++G   S+PVR
Sbjct: 314 QKDKKVKTIYP----VNGDSKLEEKKVNLSGYMDSIPVR 348


>96
          Length = 613

 Score = 19.2 bits (38), Expect = 9.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 178 KGAKLAGMYGDHLMT 192
           KGAKLA   GD +++
Sbjct: 434 KGAKLAYDVGDEILS 448


>78
          Length = 510

 Score = 19.2 bits (38), Expect = 9.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 17  MDALEQAIRAE 27
           MD LE+ IRAE
Sbjct: 317 MDILEEIIRAE 327


  Database: C:\bio_tools\blast_data\ProteinBlastDB
    Posted date:  Oct 5, 2006  9:55 AM
  Number of letters in database: 26,463
  Number of sequences in database:  103

Lambda     K      H
   0.321    0.135    0.427

Gapped
Lambda     K      H
   0.267   0.0410    0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,762
Number of Sequences: 103
Number of extensions: 855
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
Length of query: 330
Length of database: 26,463
effective HSP length: 57
effective length of query: 273
effective length of database: 20,592
effective search space:  5621616
effective search space used:  5621616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (20.5 bits)
S2: 38 (19.2 bits)