BLASTP 2.2.17 (Aug-26-2007) Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. SchŠffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference: SchŠffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. RID: KBX3B752013 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,622,235 sequences; 1,944,094,812 total letters Query= gi|111111|pir|TVFV2E|TVFV2E envelope protein Length=379 Score E Sequences producing significant alignments: (Bits) Value gb|AAA99542.1| envelope protein 702 0.0 gb|AAA99544.1| envelope protein 635 1e-180 sp|P27977|ENV_SIVVG Envelope glycoprotein gp160 precursor (En... 619 2e-175 pir||S46345 env polyprotein - simian immunodeficiency virus S... 617 5e-175 dbj|BAF32565.1| env polyprotein [Simian immunodeficiency virus] 610 3e-173 sp|P27757|ENV_SIVV1 Envelope glycoprotein gp160 precursor (En... 609 8e-173 gb|AAC99812.1| V2-gp41 junction [Simian immunodeficiency virus] 608 2e-172 gb|AAA64263.1| envelope 605 2e-171 sp|P05886|ENV_SIVVT Envelope glycoprotein gp160 precursor (En... 602 2e-170 pir||S46344 env polyprotein - simian immunodeficiency virus S... 588 2e-166 pir||S46352 env polyprotein - simian immunodeficiency virus S... 509 1e-142 pir||S46338 env polyprotein - simian immunodeficiency virus S... 508 2e-142 pir||S46341 env polyprotein - simian immunodeficiency virus S... 503 8e-141 gb|AAC33802.1| envelope glycoprotein [Simian immunodeficiency vi 501 2e-140 pir||S46343 env polyprotein - simian immunodeficiency virus S... 500 7e-140 gb|AAC33803.1| envelope glycoprotein [Simian immunodeficiency vi 499 1e-139 pir||S46337 env polyprotein - simian immunodeficiency virus S... 498 3e-139 pir||S46339 env polyprotein - simian immunodeficiency virus S... 493 8e-138 gb|AAC59620.1| envelope glycoprotein [Simian immunodeficiency vi 492 2e-137 gb|AAC99811.1| V2-V5 region [Simian immunodeficiency virus] >... 490 6e-137 gb|AAC59617.1| envelope glycoprotein [Simian immunodeficiency vi 489 1e-136 ref|NP_054372.1| envelope protein [Simian immunodeficiency vi... 486 7e-136 pir||S46335 env polyprotein - simian immunodeficiency virus S... 486 1e-135 gb|AAC59616.1| envelope glycoprotein [Simian immunodeficiency vi 485 2e-135 gb|AAF21588.1| envelope glycoprotein [Simian immunodeficiency vi 485 2e-135 gb|AAC59621.1| envelope glycoprotein [Simian immunodeficiency vi 484 3e-135 pir||S46340 env polyprotein - simian immunodeficiency virus S... 484 3e-135 pir||S46336 env polyprotein - simian immunodeficiency virus S... 484 4e-135 gb|AAC57057.1| envelope glycoprotein [Simian immunodeficiency... 484 5e-135 gb|AAF21595.1| envelope glycoprotein [Simian immunodeficiency vi 483 7e-135 gb|AAC59618.1| envelope glycoprotein [Simian immunodeficiency vi 481 3e-134 gb|AAF21592.1| envelope glycoprotein [Simian immunodeficiency vi 481 4e-134 gb|AAF21590.1| envelope glycoprotein [Simian immunodeficiency vi 481 4e-134 pir||S46342 env polyprotein - simian immunodeficiency virus S... 480 6e-134 gb|AAC59619.1| envelope glycoprotein [Simian immunodeficiency vi 479 2e-133 gb|AAF21593.1| envelope glycoprotein [Simian immunodeficiency vi 478 4e-133 gb|AAF21594.1| envelope glycoprotein [Simian immunodeficiency vi 478 4e-133 gb|AAC59615.1| envelope glycoprotein [Simian immunodeficiency vi 473 7e-132 gb|AAF21541.1| envelope glycoprotein [Simian immunodeficiency vi 471 4e-131 gb|AAC99808.1| V2-V5 region [Simian immunodeficiency virus] 471 4e-131 gb|AAF21534.1| envelope glycoprotein [Simian immunodeficiency vi 471 4e-131 gb|AAA99543.1| envelope protein >gb|AAF21542.1| envelope glyc... 470 7e-131 gb|AAF21562.1| envelope glycoprotein [Simian immunodeficiency vi 468 2e-130 gb|AAF21543.1| envelope glycoprotein [Simian immunodeficiency vi 468 3e-130 gb|AAF21563.1| envelope glycoprotein [Simian immunodeficiency vi 468 3e-130 gb|AAF21527.1| envelope glycoprotein [Simian immunodeficiency vi 467 6e-130 gb|AAF21546.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21556.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21555.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21547.1| envelope glycoprotein [Simian immunodeficiency vi 465 3e-129 gb|AAF21528.1| envelope glycoprotein [Simian immunodeficiency vi 465 3e-129 gb|AAF21531.1| envelope glycoprotein [Simian immunodeficiency vi 464 5e-129 gb|AAF21536.1| envelope glycoprotein [Simian immunodeficiency vi 463 7e-129 gb|AAF21551.1| envelope glycoprotein [Simian immunodeficiency vi 463 9e-129 gb|AAF21564.1| envelope glycoprotein [Simian immunodeficiency vi 463 9e-129 gb|AAF21549.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21544.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21550.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21565.1| envelope glycoprotein [Simian immunodeficiency vi 460 8e-128 gb|AAF21561.1| envelope glycoprotein [Simian immunodeficiency vi 460 9e-128 gb|AAC99807.1| V2-V5 region [Simian immunodeficiency virus] 459 9e-128 gb|AAF21548.1| envelope glycoprotein [Simian immunodeficiency vi 459 2e-127 gb|AAF21538.1| envelope glycoprotein [Simian immunodeficiency vi 459 2e-127 gb|AAF21554.1| envelope glycoprotein [Simian immunodeficiency vi 458 3e-127 gb|AAF21559.1| envelope glycoprotein [Simian immunodeficiency vi 456 1e-126 gb|AAF21529.1| envelope glycoprotein [Simian immunodeficiency vi 456 2e-126 gb|AAF21540.1| envelope glycoprotein [Simian immunodeficiency vi 456 2e-126 gb|AAF21560.1| envelope glycoprotein [Simian immunodeficiency vi 454 4e-126 gb|AAF21532.1| envelope glycoprotein [Simian immunodeficiency vi 454 5e-126 gb|AAC99809.1| V2-V5 region [Simian immunodeficiency virus] 453 1e-125 gb|AAC99810.1| V2-V5 region [Simian immunodeficiency virus] 451 3e-125 gb|AAF21557.1| envelope glycoprotein [Simian immunodeficiency vi 451 3e-125 gb|AAF21552.1| envelope glycoprotein [Simian immunodeficiency vi 451 4e-125 gb|AAF21558.1| envelope glycoprotein [Simian immunodeficiency vi 447 7e-124 gb|AAF21553.1| envelope glycoprotein [Simian immunodeficiency vi 443 7e-123 gb|AAF21526.1| envelope glycoprotein [Simian immunodeficiency vi 441 3e-122 gb|AAX09393.1| envelope glycoprotein [Simian immunodeficiency vi 441 3e-122 gb|AAX09392.1| envelope glycoprotein [Simian immunodeficiency vi 432 2e-119 gb|AAF21530.1| envelope glycoprotein [Simian immunodeficiency vi 427 4e-118 gb|AAA47593.1| glycoprotein 120 421 6e-116 gb|AAF21537.1| envelope glycoprotein [Simian immunodeficiency vi 393 1e-107 gb|AAF21545.1| envelope glycoprotein [Simian immunodeficiency vi 374 8e-102 dbj|BAA82439.1| envelope glycoprotein [Simian immunodeficiency v 370 8e-101 dbj|BAA82408.1| env of SIVagm [Simian immunodeficiency virus - a 358 2e-97 gb|AAT41729.1| Env [Simian immunodeficiency virus] 333 1e-89 gb|AAP46095.1| envelope glycoprotein [Simian immunodeficiency vi 331 5e-89 gb|AAC68662.1| Env [Simian immunodeficiency virus] 330 7e-89 gb|AAK64201.1| env protein [Simian immunodeficiency virus 17E-Cl 329 2e-88 gb|AAO67286.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAP46096.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAA91937.1| env protein 328 3e-88 gb|AAV69864.1| envelope glycoprotein [SIV vector pCLN8] 328 3e-88 gb|AAZ52606.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAX85828.2| envelope glycoprotein [Simian immunodeficiency vi 328 4e-88 gb|AAK64192.1| truncated envelope glycoprotein [Simian immuno... 328 5e-88 gb|AAA47765.1| envelope polyprotein 328 5e-88 gb|AAA47773.1| envelope polyprotein 328 5e-88 gb|AAX85833.2| envelope glycoprotein [Simian immunodeficiency vi 327 6e-88 gb|AAZ52607.1| envelope glycoprotein [Simian immunodeficiency vi 327 6e-88 gb|AAO67291.1| envelope glycoprotein [Simian immunodeficiency vi 327 7e-88 ALIGNMENTS >gb|AAA99542.1| envelope protein Length=379 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 344/379 (90%), Positives = 346/379 (91%), Gaps = 0/379 (0%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT Sbjct 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHRTSNDS LILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC Sbjct 61 QIWQKHRTSNDSVLILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NWKGAWKEVKEEIV LPKERYRGTND KRIF QRQWGDPETANLWFNCHGEFFYCK Sbjct 121 HFQGNWKGAWKEVKEEIVKLPKERYRGTNDTKRIFLQRQWGDPETANLWFNCHGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVINDWYTISKK 240 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TY+PPREGHLECTSTVTGMTVELNYI +NRTNVTLSPQIESIWAAELDRYKLVEITPIGF Sbjct 241 TYSPPREGHLECTSTVTGMTVELNYINQNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 301 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 360 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 361 LAAVEAQQQMLKLTIWGVK 379 >gb|AAA99544.1| envelope protein Length=375 Score = 635 bits (1638), Expect = 1e-180, Method: Composition-based stats. Identities = 312/379 (82%), Positives = 327/379 (86%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCND DYDGFK NCSNVSVVHCT LMNTTVTTGLLLNGSYSENRT Sbjct 1 ELRLRYCAPAGFALLKCNDYDYDGFKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYSENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR SNDS LI +NKHYNLT+TCKRPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWQKHRVSNDSVLIQINKHYNLTITCKRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW GAWKE+K+EIV LPK+RYRGTND ++I+ RQWGDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWHGAWKEIKQEIVKLPKDRYRGTNDTEQIYLTRQWGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T +ADHN+C N+ TK+G RAPGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNKTWNADHNQCDNS--TKTG--RAPGPCVQRTYVACHIRSVINDWYTISKK 236 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNYI NRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 237 TYAPPREGHLQCTSTVTGMTVELNYINDNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 296 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKR+PFV VQSQHLLAGILQQQKNL Sbjct 297 APTEVRRYTGGHERQKRIPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 356 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 357 LAAVEAQQQMLKLTIWGVK 375 >sp|P27977|ENV_SIVVG Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA91919.1| env polyprotein [Simian immunodeficiency virus] Length=877 Score = 619 bits (1595), Expect = 2e-175, Method: Composition-based stats. Identities = 306/379 (80%), Positives = 323/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCND DY GFKTNCSNVSVVHCTNL+NTTVTTGLLLNGSYSENRT Sbjct 231 ELRLRYCAPAGFALLKCNDYDYAGFKTNCSNVSVVHCTNLINTTVTTGLLLNGSYSENRT 290 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR SNDS L+L NKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQ+YN RLRQAWC Sbjct 291 QIWQKHRVSNDSVLVLFNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQRYNTRLRQAWC 350 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAWKEVK EIV LPK+RY+GTND + I+ QR +GDPE ANLWFNC GEFFYCK Sbjct 351 HFQGNWRGAWKEVKNEIVKLPKDRYQGTNDTEEIYLQRLFGDPEAANLWFNCQGEFFYCK 410 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN TVD DHN C +GTK G +APGPC QRTYVACHIRSVI T+S+K Sbjct 411 MDWFLNYLNNRTVDPDHNPC---NGTK-GKGKAPGPCAQRTYVACHIRSVINDWYTLSRK 466 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGM+VELNY KNRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 467 TYAPPREGHLQCTSTVTGMSVELNYNSKNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 526 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGH+R KRVPFV VQSQHLLAGILQQQKNL Sbjct 527 APTEVRRYTGGHDRTKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 586 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 587 LAAVEAQQQMLKLTIWGVK 605 >pir||S46345 env polyprotein - simian immunodeficiency virus SIVagm (isolate VER-2) (fragment) gb|AAA21503.1| envelope protein Length=375 Score = 617 bits (1590), Expect = 5e-175, Method: Composition-based stats. Identities = 299/379 (78%), Positives = 324/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDHDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIW+KH SNDS +IL+NK +NLTVTC+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWRKHGVSNDSVIILINKAFNLTVTCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+E+++EI LP +YRGTND ++IF QRQ+GDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWRGAWEEIRQEITKLPPHKYRGTNDTEKIFLQRQFGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHN C +G+++ + RAPGPC QRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLTVDADHNSC---NGSRT-SPRAPGPCAQRTYVACHIRSVINDWYTISKK 236 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY +NRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 237 TYAPPREGHLQCTSTVTGMTVELNYNSRNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 296 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 297 APTDVRRYTGGHERQKRVPFVQGFLGFLGAAGTAMGATATALTVQSQHLLAGILQQQKNL 356 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 357 LAAVEAQQQMLKLTIWGVK 375 >dbj|BAF32565.1| env polyprotein [Simian immunodeficiency virus] Length=863 Score = 610 bits (1574), Expect = 3e-173, Method: Composition-based stats. Identities = 299/379 (78%), Positives = 323/379 (85%), Gaps = 5/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 +LRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 224 QLRLRYCAPAGYALLKCNDEDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 283 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +N++ LIL NKHYNL+VTC+RPGNKTVLPVTIMAGLVFHSQKYN++LRQAWC Sbjct 284 QIWQKHRVNNNTVLILFNKHYNLSVTCRRPGNKTVLPVTIMAGLVFHSQKYNMKLRQAWC 343 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+EVK++IV LPK+RY+GTN+ + I+ QRQWGDPE +NLWFNC GEFFYCK Sbjct 344 HFEGNWRGAWREVKQKIVELPKDRYKGTNNTEHIYLQRQWGDPEASNLWFNCQGEFFYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T DADHN C S K G+ APGPCVQRTYVACHIRSVI T+SKK Sbjct 404 MDWFLNYLNNKTWDADHNFC---SSKKKGH--APGPCVQRTYVACHIRSVINDWYTLSKK 458 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+C STVTGMTVELNY KNRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 459 TYAPPREGHLQCRSTVTGMTVELNYNSKNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 518 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 519 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 578 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 579 LAAVEAQQQMLKLTIWGVK 597 >sp|P27757|ENV_SIVV1 Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA91911.1| env polyprotein Length=768 Score = 609 bits (1571), Expect = 8e-173, Method: Composition-based stats. Identities = 313/379 (82%), Positives = 323/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY GFK CSNVSVVHCT LMNTTVTTGLLLNGSYSENRT Sbjct 226 ELRLRYCAPAGYALLKCNDWDYAGFKPECSNVSVVHCTTLMNTTVTTGLLLNGSYSENRT 285 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKH SNDS LILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 286 QIWQKHGVSNDSVLILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 345 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NWKGAWKEV+EEIV LPKERY+GTND +IF QRQ+GDPE ANLWFNC GEFFYCK Sbjct 346 HFQGNWKGAWKEVQEEIVKLPKERYQGTNDTNKIFLQRQFGDPEAANLWFNCQGEFFYCK 405 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHN CKN +G R+PGPCVQRTYVACHIRSVI TISKK Sbjct 406 MDWFLNYLNNLTVDADHNHCKNN----AGKGRSPGPCVQRTYVACHIRSVINDWYTISKK 461 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY +NRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 462 TYAPPREGHLQCTSTVTGMTVELNYNNQNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 521 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGG ERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 522 APTEVRRYTGGQERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 581 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAV AQQQMLKLTIWGVK Sbjct 582 LAAVGAQQQMLKLTIWGVK 600 >gb|AAC99812.1| V2-gp41 junction [Simian immunodeficiency virus] Length=371 Score = 608 bits (1567), Expect = 2e-172, Method: Composition-based stats. Identities = 298/379 (78%), Positives = 316/379 (83%), Gaps = 8/379 (2%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTV+TGLLLNGSY+ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDYDYNGYKQNCSNVSVVHCTGLMNTTVSTGLLLNGSYAENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWQKHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAWKEV+++IV LPK+RYRGTN ++IF QRQWGDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWRGAWKEVRQKIVELPKDRYRGTNQTEQIFLQRQWGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNL+VDADHN C S R PGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLSVDADHNPCPKKS-------RQPGPCVQRTYVACHIRSVIDDWYTISKK 233 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAAEL RYKLVEITPIGF Sbjct 234 TYAPPREGHLQCTSTVTGMTVELNYNSDNRTNVTLSPQIEGIWAAELGRYKLVEITPIGF 293 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRY G RQKRVPFV VQSQHLLAGILQQQKNL Sbjct 294 APTDVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 352 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQMLKLTIWGVK Sbjct 353 LAAVEQQQQMLKLTIWGVK 371 >gb|AAA64263.1| envelope Length=877 Score = 605 bits (1560), Expect = 2e-171, Method: Composition-based stats. Identities = 298/379 (78%), Positives = 319/379 (84%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKC+D DY+G+K NCSNVSVVHCT LMNTTV+TGLLLNGSYSENRT Sbjct 231 ELRLRYCAPAGFALLKCHDHDYNGYKQNCSNVSVVHCTGLMNTTVSTGLLLNGSYSENRT 290 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +NDS ++L NK+YNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 291 QIWQKHRVNNDSVIVLFNKYYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWC 350 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF W+ AWKEVKEEI+ LPK+RYRGTND ++I+ QRQ+GDPE ANLWFNC GEFFYCK Sbjct 351 HFQGRWREAWKEVKEEIIKLPKDRYRGTNDTEKIYLQRQFGDPEAANLWFNCQGEFFYCK 410 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN +VDA+HN+C N TK GN APGPCVQRTYVACHIRSVI TISKK Sbjct 411 MDWFLNYLNNQSVDANHNQCSNE--TKKGN--APGPCVQRTYVACHIRSVINDWYTISKK 466 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLECTSTVTGMTVELNY RTNVTLSPQIE IWAAEL RYKLVEITPIGF Sbjct 467 VYAPPREGHLECTSTVTGMTVELNYNNNYRTNVTLSPQIEGIWAAELGRYKLVEITPIGF 526 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT VRRYTGG +R KRVPFV VQSQHLLAGI+QQQKNL Sbjct 527 APTNVRRYTGGQDRSKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGIMQQQKNL 586 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 587 LAAVEAQQQMLKLTIWGVK 605 >sp|P05886|ENV_SIVVT Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] emb|CAA30663.2| env polyprotein [Simian immunodeficiency virus] Length=865 Score = 602 bits (1551), Expect = 2e-170, Method: Composition-based stats. Identities = 296/379 (78%), Positives = 321/379 (84%), Gaps = 5/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 +LRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 225 QLRLRYCAPAGYALLKCNDEDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 284 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +N++ LIL NKHYNL+VTC+RPGNKTVLPVTIMAGLVFHSQKYN++LRQAWC Sbjct 285 QIWQKHRVNNNTVLILFNKHYNLSVTCRRPGNKTVLPVTIMAGLVFHSQKYNMKLRQAWC 344 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+EVK++IV LPK+RY+GTN+ + I+ QRQWGDPE +NLWFNC GEFFYCK Sbjct 345 HFEGNWRGAWREVKQKIVELPKDRYKGTNNTEHIYLQRQWGDPEASNLWFNCQGEFFYCK 404 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T DA HN C S K G+ APGPCVQRTYVA HIRSVI T+SKK Sbjct 405 MDWFLNYLNNKTWDAYHNFC---SSKKKGH--APGPCVQRTYVAYHIRSVINDSYTLSKK 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+C STVTGMTVELNY KNRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 460 TYAPPREGHLQCRSTVTGMTVELNYNSKNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 519 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQS+HLLAGILQQQKNL Sbjct 520 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAASSLTVQSRHLLAGILQQQKNL 579 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 580 LAAVEAQQQMLKLTIWGVK 598 >pir||S46344 env polyprotein - simian immunodeficiency virus SIVagm (isolate VER-1) (fragment) gb|AAA21502.1| envelope protein Length=372 Score = 588 bits (1516), Expect = 2e-166, Method: Composition-based stats. Identities = 284/379 (74%), Positives = 314/379 (82%), Gaps = 7/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND +Y GF C NVSVVHCT LMNTTV+TGLLLNGSY+ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDRNYTGFAPRCRNVSVVHCTGLMNTTVSTGLLLNGSYTENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 +IWQKH+ SN+S +I +NKHYNLT+ C RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 61 EIWQKHKVSNNSVIIRINKHYNLTIRCVRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF +W+GAW+E+K++IV LPKERY+GTND K+IF QRQWGDPE +NLWFNCHGEFFYCK Sbjct 121 HFKGDWRGAWREIKQKIVELPKERYQGTNDTKQIFLQRQWGDPEASNLWFNCHGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDW LNY+NNLTVDA+HN C +T G + PGPCVQRTYV CHIRSVI +++K Sbjct 181 MDWMLNYINNLTVDANHNNCNSTQGKR------PGPCVQRTYVGCHIRSVINDWYKLARK 234 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHLECTSTVTGM VELNYI KNRTNVTLSPQIE+IWA+EL RYKLVEITPIGF Sbjct 235 TYAPPREGHLECTSTVTGMAVELNYIHKNRTNVTLSPQIEAIWASELGRYKLVEITPIGF 294 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT VRRYTG R+KRVPFV VQSQHLLAGILQQQKNL Sbjct 295 APTPVRRYTGP-SREKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 353 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 354 LAAVEAQQQMLKLTIWGVK 372 >pir||S46352 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-1) gb|AAA21510.1| envelope glycoprotein [Simian immunodeficiency virus - agm.sab-1] Length=732 Score = 509 bits (1311), Expect = 1e-142, Method: Composition-based stats. Identities = 257/378 (67%), Positives = 284/378 (75%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTTV+TG+ +NGSY NRT+ Sbjct 223 FRLRYCAPAGYALLRCADTDYSGHKA-CRNVTVSACTRLINTTVSTGIGINGSYVANRTE 281 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ SNDS +I LN+++NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWC Sbjct 282 IWQKNGNSNDSVIIRLNRYFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCW 341 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F NW+GAWKEVKE IV LP ++Y GTND +IF QRQWGDPE+ +FNC GEFFYCKM Sbjct 342 FGGNWRGAWKEVKETIVRLPPKKYSGTNDTNKIFLQRQWGDPESEFFFFNCQGEFFYCKM 401 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C K PC QRTYV CHIR V+ T+SKKT Sbjct 402 DWFLNYLNNKSVDPDHNNCA---------KNNTKPCWQRTYVPCHIRQVVNDWYTLSKKT 452 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQIESIWA EL YKLVEI PIGFA Sbjct 453 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIESIWANELGDYKLVEIKPIGFA 512 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PT+VRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 513 PTKVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 571 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 572 AAVEQQQQMLKLTIWGVK 589 >pir||S46338 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-3) (fragment) gb|AAA21496.1| envelope protein Length=368 Score = 508 bits (1309), Expect = 2e-142, Method: Composition-based stats. Identities = 257/378 (67%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTTV+TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCADTDYSGHK-KCKNVTVSACTRLINTTVSTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ SNDS +I LN+H+NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWC Sbjct 61 IWQKNGNSNDSVIIRLNRHFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F NW+GAW+EVKE IV LP +RY+GT D +IF QRQWGDPE +FNC GEFFYCKM Sbjct 121 FGGNWRGAWQEVKETIVALPPDRYQGTKDTNKIFLQRQWGDPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C TS K C QR Y CHIR V+ T+SKKT Sbjct 181 DWFLNYLNNQSVDPDHNPCNKTSDKK---------CWQRNYAPCHIRQVVNDWYTLSKKT 231 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQIESIWA EL YKLVEI PIGFA Sbjct 232 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIESIWANELGDYKLVEIKPIGFA 291 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 292 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 350 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 351 AAVEQQQQMLKLTIWGVK 368 >pir||S46341 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN17) (fragment) gb|AAA21499.1| envelope protein Length=371 Score = 503 bits (1295), Expect = 8e-141, Method: Composition-based stats. Identities = 251/383 (65%), Positives = 285/383 (74%), Gaps = 18/383 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGFGI-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 +WQKH SNDS +I LNK YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWCH Sbjct 61 VWQKHGVSNDSVIIKLNKFYNLTIKCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F WK AWKEV+E IV LPKE+YRGTND K+I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FQGKWKEAWKEVRETIVKLPKEKYRGTNDTKKIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTV-----DADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLET 236 DWF+NYLNN + D + N+CK+ P C +R+YV CHIRSV+ T Sbjct 181 DWFVNYLNNDSARRRKEDVEGNDCKD-----------PRKCFKRSYVPCHIRSVVNDWYT 229 Query 237 ISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEIT 296 +SKKTYAPPREGHLECTSTVT M V L+Y+ KN TNVTL+ +E+IWA EL RYK++EI Sbjct 230 LSKKTYAPPREGHLECTSTVTSMMVSLDYVNKNMTNVTLTANLENIWAYELGRYKIIEIK 289 Query 297 PIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQ 356 PIGFAPT+VRRY G R+KRVPFV VQSQ LLAGILQQ Sbjct 290 PIGFAPTDVRRYVGP-TREKRVPFVLGSLGFLGRAGAAMGATATELTVQSQQLLAGILQQ 348 Query 357 QKNLLAAVEAQQQMLKLTIWGVK 379 QKNLLAAVE QQQMLKLTIWGVK Sbjct 349 QKNLLAAVEQQQQMLKLTIWGVK 371 >gb|AAC33802.1| envelope glycoprotein [Simian immunodeficiency virus] Length=871 Score = 501 bits (1291), Expect = 2e-140, Method: Composition-based stats. Identities = 254/378 (67%), Positives = 284/378 (75%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K +CSNVSV CT L+NTT++TG+ +NGSY NRT+ Sbjct 226 FRLRYCAPAGYALLRCRDTDYSGHK-DCSNVSVSACTRLINTTISTGIGINGSYVANRTE 284 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SND+ +I LN+HYNLT+ C+RPGNKTVLPVTIMAGLVFHSQK N +L+QAWC Sbjct 285 IWQENGNSNDTVIIRLNRHYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKDNTKLKQAWCW 344 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+ AW+EVKE IV LPK+R GTND RIF +RQWGDPE +FNC GEFFYCKM Sbjct 345 FGGRWRSAWREVKETIVELPKDRDSGTNDTSRIFLRRQWGDPEAEFFFFNCQGEFFYCKM 404 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLN+LNN +VD DHN C TK +K+ C QRTYV CHIR V+ T+SKKT Sbjct 405 DWFLNFLNNQSVDPDHNNC-----TKQNDKK----CWQRTYVPCHIRQVVNDWYTLSKKT 455 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 456 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 515 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 516 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 574 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 575 AAVEQQQQMLKLTIWGVK 592 >pir||S46343 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN49) (fragment) gb|AAA21501.1| envelope protein Length=379 Score = 500 bits (1287), Expect = 7e-140, Method: Composition-based stats. Identities = 250/384 (65%), Positives = 290/384 (75%), Gaps = 12/384 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y G+ C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGYGI-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKHR +NDS +I LNK+Y L VTC+RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWCH Sbjct 61 IWQKHRINNDSVIIKLNKYYKLGVTCRRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LP++RY GTN+ +I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FHGDWKGAWKEVRETIVKLPRDRYSGTNNTNQIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLT-----VDADHNECKN-TSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLE 235 DWF+N+LNN + D + N C N T G +G+++ C++RTYV CHIRSV+ Sbjct 181 DWFVNWLNNESAGGNYTDVEGNPCSNSTKGGMTGSRK----CLKRTYVGCHIRSVVNDWY 236 Query 236 TISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEI 295 ++SKKTYAPPREGHLECTSTVT M V L+Y KN TNVTL+ +E+IWA EL RYKL+EI Sbjct 237 SLSKKTYAPPREGHLECTSTVTSMMVSLDYNSKNMTNVTLTANLENIWAYELGRYKLIEI 296 Query 296 TPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQ 355 PIGFAPTEVRRY G R+KRVPFV VQSQ LLAGILQ Sbjct 297 KPIGFAPTEVRRYVGP-TREKRVPFVLGFLGFLGRAGAAMGATETELTVQSQQLLAGILQ 355 Query 356 QQKNLLAAVEAQQQMLKLTIWGVK 379 QQKNLLAAVE QQQMLKLTIWGVK Sbjct 356 QQKNLLAAVEQQQQMLKLTIWGVK 379 >gb|AAC33803.1| envelope glycoprotein [Simian immunodeficiency virus] Length=871 Score = 499 bits (1286), Expect = 1e-139, Method: Composition-based stats. Identities = 251/378 (66%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K +CSNVSV CT L+NTT++TG+ +NGSY NRT+ Sbjct 226 FRLRYCAPAGYALLRCRDTDYSGHK-DCSNVSVSACTRLINTTISTGIGINGSYVANRTE 284 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SND+ +I LN+HYNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +L+QAWC Sbjct 285 IWQENGNSNDTVIIRLNRHYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLKQAWCW 344 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W+ AW+ V+E IV LPK+RY GTND +IF RQWGDPET +FNC GEFFYCKM Sbjct 345 FGGHWRSAWQGVEETIVELPKDRYSGTNDTSKIFLHRQWGDPETEFFFFNCQGEFFYCKM 404 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLN LNN +VD DHN C + K C QRTYV CHIR V+ T+SKKT Sbjct 405 DWFLNGLNNQSVDPDHNNCTKQNDNK---------CWQRTYVPCHIRQVVNDWYTLSKKT 455 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 456 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 515 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQ+RVPFV VQSQ LLAGILQQQKNLL Sbjct 516 PTEVRRYTGP-ERQERVPFVLGFLGFLGAAGATMGAAATTLTVQSQQLLAGILQQQKNLL 574 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 575 AAVEQQQQMLKLTIWGVK 592 >pir||S46337 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-2) (fragment) gb|AAA21495.1| envelope protein Length=369 Score = 498 bits (1281), Expect = 3e-139, Method: Composition-based stats. Identities = 251/378 (66%), Positives = 282/378 (74%), Gaps = 10/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTT++TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCADTDYSGHKA-CKNVTVSACTRLINTTISTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ +N + +I LN+H+NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 61 IWQKNGNANHTVIIRLNRHFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W+GAW+EVKE+IV LP +RY GTND +IF QRQWGDPE +FNC GEFFYCKM Sbjct 121 FGGDWRGAWQEVKEKIVALPPDRYSGTNDTNKIFLQRQWGDPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C GN + C QRTYV CHIR ++ T+SKKT Sbjct 181 DWFLNYLNNQSVDPDHNPC-------GGNDKNNRKCWQRTYVPCHIRQIVNDWYTLSKKT 233 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VEL Y KNRTNVTLSP IESIWA EL YKLVEI PIGFA Sbjct 234 YAPPREGHLECNSTATALYVELLYNSKNRTNVTLSPHIESIWANELGDYKLVEIKPIGFA 293 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 294 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 352 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 353 AAVE-QQQMLKLTIWGVK 369 >pir||S46339 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-4) (fragment) gb|AAA21497.1| envelope protein Length=368 Score = 493 bits (1269), Expect = 8e-138, Method: Composition-based stats. Identities = 254/378 (67%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D+DY G K NC NVSV CT L+NTTV+TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCRDSDYRGHK-NCQNVSVSACTRLINTTVSTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SN++A+I LN++YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 IWQENGNSNNTAIIRLNRYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+GAW+E KEEIV L ERY GT + +IF QRQWG PE +FNC GEFFYCKM Sbjct 121 FGGKWRGAWQEAKEEIVKLSPERYSGTKNTSQIFLQRQWGGPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD +HN C T +KR C QRTYV CHIR V+ T+SKKT Sbjct 181 DWFLNYLNNQSVDPNHNTC-----TPKSDKR----CWQRTYVPCHIRQVVNDWYTLSKKT 231 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 232 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 291 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PT VRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 292 PTNVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 350 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 351 AAVEQQQQMLKLTIWGVK 368 >gb|AAC59620.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 492 bits (1266), Expect = 2e-137, Method: Composition-based stats. Identities = 239/285 (83%), Positives = 250/285 (87%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS LIL N+HYNLTVTCKRPGNKT Sbjct 1 VHCTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNRHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQ YNLRLRQAWCHF NWKGAWKEV++E+V LPK+RYRGT RI Sbjct 61 VLPVTIMAGLVFHSQSYNLRLRQAWCHFEGNWKGAWKEVRQELVKLPKDRYRGTKHTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 + QRQ+GDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH T+ + AP Sbjct 121 YLQRQFGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHYYQLPTN-----RQDAP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYKDNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIESIWAAEL RYKLVEITPIGFAPTEVRRYTGGHER KRVP Sbjct 236 LSPQIESIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERTKRVP 280 >gb|AAC99811.1| V2-V5 region [Simian immunodeficiency virus] gb|AAF21586.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21587.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21589.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21591.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 490 bits (1262), Expect = 6e-137, Method: Composition-based stats. Identities = 238/304 (78%), Positives = 255/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59617.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 489 bits (1260), Expect = 1e-136, Method: Composition-based stats. Identities = 238/285 (83%), Positives = 252/285 (88%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSYSENRTQIWQKHR +NDS LIL NK YNLTV C+RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNKWYNLTVRCRRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYN RLRQAWCHF NW+GAWKEV+EE+V LPK+RYRGTN ++I Sbjct 61 VLPVTIMAGLVFHSQKYNTRLRQAWCHFQGNWRGAWKEVREELVKLPKDRYRGTNKTEQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQ+GDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHN+C N ++G RAP Sbjct 121 FLQRQFGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNKCNN---NRTG--RAP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLE STVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLELLSTVTGMTVELNYNSNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE IWAAEL RYKLVEITPIGFAPTE+RRYTGGHERQK VP Sbjct 236 LSPQIEGIWAAELGRYKLVEITPIGFAPTEIRRYTGGHERQKTVP 280 >ref|NP_054372.1| envelope protein [Simian immunodeficiency virus] sp|Q02837|ENV_SIVG1 Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA47591.1| envelope protein [Simian immunodeficiency virus] gb|AAA91928.1| envelope glycoprotein [Simian immunodeficiency virus] Length=854 Score = 486 bits (1252), Expect = 7e-136, Method: Composition-based stats. Identities = 249/379 (65%), Positives = 281/379 (74%), Gaps = 10/379 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LR+RYCAPAG+ALLKCND DY GF C NVSVVHCT L+NTT+TTG+ LNGS SENRT+ Sbjct 215 LRVRYCAPAGYALLKCNDKDYRGFAPKCKNVSVVHCTRLINTTITTGIGLNGSRSENRTE 274 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK ND+ +I LNK YNLTV C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWCH Sbjct 275 IWQKGGNDNDTVIIKLNKFYNLTVRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCH 334 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+EE+ K + + I +R WGDPE+AN WFNC GEFFYCKM Sbjct 335 FQGDWKGAWKEVREEV---KKVKNLTEVSIENIHLRRIWGDPESANFWFNCQGEFFYCKM 391 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NYLNN T DA+ T+ T K PGPCVQRTYVACHIR V+ T+SKK Sbjct 392 DWFINYLNNRTEDAE-----GTNRTCDKGKPGPGPCVQRTYVACHIRQVVNDWYTVSKKV 446 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLEC S+VT + V ++Y K+ NVTLSPQ+ SIWA EL YKLVEITPIGF Sbjct 447 YAPPREGHLECNSSVTALYVAIDYNNKSGPINVTLSPQVRSIWAYELGDYKLVEITPIGF 506 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG R+KRVPFV VQS+HLLAGILQQQKNL Sbjct 507 APTDVRRYTGP-TREKRVPFVLGFLGFLGAAGTAMGAAATTLTVQSRHLLAGILQQQKNL 565 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQ+LKLTIWGVK Sbjct 566 LAAVEQQQQLLKLTIWGVK 584 >pir||S46335 env polyprotein - simian immunodeficiency virus SIVagm (isolate GRI-3) (fragment) gb|AAA21493.1| envelope protein Length=371 Score = 486 bits (1250), Expect = 1e-135, Method: Composition-based stats. Identities = 245/379 (64%), Positives = 280/379 (73%), Gaps = 10/379 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LR+RYCAPAG+ALLKCND DY+GF C NVSVVHCT L+NTT+TTG+ LNGS ENRT+ Sbjct 2 LRVRYCAPAGYALLKCNDKDYNGFAPKCKNVSVVHCTRLINTTITTGIGLNGSRVENRTE 61 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SND+ +I LNK YNLTV C+RPGNKT+LPVTIMAG VFHSQKYN +L+QAWCH Sbjct 62 IWQEKGNSNDTVIIKLNKFYNLTVRCRRPGNKTILPVTIMAGRVFHSQKYNTKLKQAWCH 121 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 NW GAWKEV+E+I +E+ + I +RQWGDPE AN WFNCHGEFFYCKM Sbjct 122 SQGNWLGAWKEVREKI---KEEKNLTEVKIENIHLRRQWGDPEAANFWFNCHGEFFYCKM 178 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NYLNN TVDAD C T + PGPC ++TYVACHIR V+ T++KKT Sbjct 179 DWFINYLNNQTVDADGKSC-----TSHKKGQGPGPCAKKTYVACHIRQVVNDWYTLTKKT 233 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLEC STVT + VE+NY K+ NVTLS Q+ SIWA EL YKLVEITPIGF Sbjct 234 YAPPREGHLECNSTVTALYVEINYNNKSGPINVTLSSQVRSIWAYELGDYKLVEITPIGF 293 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG R+KRVPFV VQS+HLLAGILQQQKNL Sbjct 294 APTDVRRYTGP-SREKRVPFVLGFLGFLGAAGTAMGAAATALTVQSRHLLAGILQQQKNL 352 Query 361 LAAVEAQQQMLKLTIWGVK 379 L AVE QQQ+LKLTIWGVK Sbjct 353 LVAVEQQQQLLKLTIWGVK 371 >gb|AAC59616.1| envelope glycoprotein [Simian immunodeficiency virus] Length=283 Score = 485 bits (1249), Expect = 2e-135, Method: Composition-based stats. Identities = 234/285 (82%), Positives = 248/285 (87%), Gaps = 2/285 (0%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSY+ENRTQIWQKHR +NDS ++L NK+YNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYAENRTQIWQKHRVNNDSVIVLFNKYYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAG VFHSQKYN RLRQAWCHF NWKGAWKEV+E+IV LPK+RYRGTN RI Sbjct 61 VLPVTIMAGRVFHSQKYNTRLRQAWCHFRGNWKGAWKEVREKIVQLPKDRYRGTNRTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQWGDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVD C N + KS RAP Sbjct 121 FLQRQWGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDRRDKPCNNNNTNKS--SRAP 178 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY +RTNVT Sbjct 179 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNNNDRTNVT 238 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQ+ESIWAAEL RYKLVEITPIGFAPT++RRYTGGHERQKRVP Sbjct 239 LSPQVESIWAAELGRYKLVEITPIGFAPTDIRRYTGGHERQKRVP 283 >gb|AAF21588.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 485 bits (1248), Expect = 2e-135, Method: Composition-based stats. Identities = 236/304 (77%), Positives = 254/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ +NDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKVNNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 HSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 SHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59621.1| envelope glycoprotein [Simian immunodeficiency virus] Length=283 Score = 484 bits (1247), Expect = 3e-135, Method: Composition-based stats. Identities = 234/285 (82%), Positives = 252/285 (88%), Gaps = 2/285 (0%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCTNLMNTTVTTGLLLNGSYSENRT+IWQKH SNDS LILLNKHYNLTVTCKRPGNKT Sbjct 1 VHCTNLMNTTVTTGLLLNGSYSENRTEIWQKHGVSNDSVLILLNKHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 V+PVTIMAGLVFHSQKYNLRLRQA CHF NWKGAWKEVK++IV LPKE+YRGT++ ++I Sbjct 61 VVPVTIMAGLVFHSQKYNLRLRQASCHFQGNWKGAWKEVKQKIVELPKEKYRGTSNTEQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QR +GDPE ANLWFNC GEFFYCKMDWFLNYLNN+ +D D+NEC TK GN AP Sbjct 121 FLQRHFGDPEAANLWFNCQGEFFYCKMDWFLNYLNNVHLDPDYNECHLNDTTKKGN--AP 178 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSV+ T+SK+ APPREGHL+CTSTVTGM VELNY NRTNVT Sbjct 179 GPCVQRTYVACHIRSVVNDWYTVSKRNNAPPREGHLQCTSTVTGMAVELNYNSDNRTNVT 238 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE+IWAAEL RYKLVEITPIGFAPTEVRRYTGGHERQKRVP Sbjct 239 LSPQIENIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 283 >pir||S46340 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN-1) (fragment) gb|AAA21498.1| envelope protein Length=373 Score = 484 bits (1247), Expect = 3e-135, Method: Composition-based stats. Identities = 240/378 (63%), Positives = 283/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ +NGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGFGV-CRNVSVVSCTGLMNTTVSSAFGINGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SN+S +I LNKHY L + C+RPGNKTVLPVTIMAGLVFHSQ+YN +LRQAWCH Sbjct 61 IWQKHGVSNNSVIIKLNKHYKLKIVCRRPGNKTVLPVTIMAGLVFHSQQYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAW+EV++ IV LPKE+YRGTN+ ++I+ RQWGDPE AN+W NC GEFFYC Sbjct 121 FQGDWKGAWREVRKTIVELPKEKYRGTNNTRQIWLSRQWGDPEAANIWLNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+N+LNN + + + + + T +KR C +RTYV CHIRS++ T+SKKT Sbjct 181 DWFVNWLNNESNSGRNVDVEGNNCTTGKDKR----CYKRTYVPCHIRSIVNDWYTLSKKT 236 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT M V L+Y K RTNVTL+ +E+IWA EL RYKL+EI PIGFA Sbjct 237 YAPPREGHLECTSTVTSMMVSLDYNSKERTNVTLTANLENIWAYELGRYKLIEIEPIGFA 296 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTE+RRY G R+KRVPFV VQSQ LLAG+LQQQKNLL Sbjct 297 PTEIRRYVGP-TREKRVPFVLGFLGFLGAAGAAMGATATALTVQSQQLLAGMLQQQKNLL 355 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 356 AAVEQQQQMLKLTIWGVK 373 >pir||S46336 env polyprotein - simian immunodeficiency virus SIVagm (isolate GRI-2) (fragment) gb|AAA21494.1| envelope protein Length=367 Score = 484 bits (1246), Expect = 4e-135, Method: Composition-based stats. Identities = 245/379 (64%), Positives = 284/379 (74%), Gaps = 14/379 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFALL+C D +Y+GF +C NV+V HCT L+NTTV+TG+ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFALLRCLDKNYNGFAPSCKNVTVTHCTRLINTTVSTGIGLNGSRAENRTE 61 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SN++ +I LNK YNLTV C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWCH Sbjct 62 IWQEKGNSNNTVIIKLNKFYNLTVRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCH 121 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W GAWKEVK+E+ K + T+D K +RQWGDPE AN WF+C GEFFYCKM Sbjct 122 FQGDWHGAWKEVKQEV---KKAKNLTTDDIK---LRRQWGDPEAANFWFSCQGEFFYCKM 175 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NY+NN TVDAD N+C G PGPCVQRTYVACHIR V+ T++KKT Sbjct 176 DWFINYINNETVDADGNKCNKPKGP------GPGPCVQRTYVACHIRQVVNDWYTLTKKT 229 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG LEC S+VT + VE+NY ++ NVTLSPQI SIWA EL YKLVEITPIGF Sbjct 230 YRPPREGQLECNSSVTALYVEINYNNESGPINVTLSPQIRSIWAYELGDYKLVEITPIGF 289 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG +QKRVPFV VQS+HLLAGILQQQ+NL Sbjct 290 APTDVRRYTGP-TKQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSRHLLAGILQQQRNL 348 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQ+LKLTIWGVK Sbjct 349 LAAVEQQQQLLKLTIWGVK 367 >gb|AAC57057.1| envelope glycoprotein [Simian immunodeficiency virus - agm.tan-1] Length=879 Score = 484 bits (1245), Expect = 5e-135, Method: Composition-based stats. Identities = 241/378 (63%), Positives = 283/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ +NGS +ENRT+ Sbjct 224 LRLRYCAPAGFAILKCKDTNYTGFGV-CRNVSVVSCTGLMNTTVSSAFGINGSQAENRTE 282 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SN+S +I LNKHY L + C+RPGNKTVLPVTIMAGLVFHSQ+YN +LRQAWCH Sbjct 283 IWQKHGVSNNSVIIKLNKHYKLKIVCRRPGNKTVLPVTIMAGLVFHSQQYNTKLRQAWCH 342 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAW+EV++ IV LPKE+YRGTN+ ++I+ RQWGDPE AN+W NC GEFFYC Sbjct 343 FQGDWKGAWREVRKTIVELPKEKYRGTNNTRQIWLSRQWGDPEAANIWLNCQGEFFYCTP 402 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+N+LNN + + + + + T +KR C +RTYV CHIRS++ T+SKKT Sbjct 403 DWFVNWLNNESNSGRNVDVEGNNCTTGKDKR----CYKRTYVPCHIRSIVNDWYTLSKKT 458 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT M V L+Y K RTNVTL+ +E+IWA EL RYKL+EI PIGFA Sbjct 459 YAPPREGHLECTSTVTSMMVSLDYNSKERTNVTLTANLENIWAYELGRYKLIEIEPIGFA 518 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTE+RRY G R+KRVPFV VQSQ LLAGILQQQKNLL Sbjct 519 PTEIRRYVGP-TREKRVPFVLGFLGFLGAAGAAMGATATALTVQSQQLLAGILQQQKNLL 577 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 578 AAVEQQQQMLKLTIWGVK 595 >gb|AAF21595.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 483 bits (1244), Expect = 7e-135, Method: Composition-based stats. Identities = 235/304 (77%), Positives = 253/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I +KHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFSKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN + RQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKSRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59618.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 481 bits (1239), Expect = 3e-134, Method: Composition-based stats. Identities = 236/285 (82%), Positives = 250/285 (87%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSYSENRTQIWQKHR +NDS +IL NKHYNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYSENRTQIWQKHRVNNDSVIILFNKHYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYN++LRQAWCHF NW+GAWKEV+E+IV LPKERYRGTN+ K+I Sbjct 61 VLPVTIMAGLVFHSQKYNMKLRQAWCHFRGNWRGAWKEVREKIVKLPKERYRGTNNTKQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQ+GDPE ANLWFN HGEFFYCKMDWFLNYLNNLTVD N ++ K GN AP Sbjct 121 FLQRQFGDPEAANLWFNRHGEFFYCKMDWFLNYLNNLTVDPIINSVQH---KKKGN--AP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRT+VACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTHVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNSNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE IWAAEL RYKLVEITPIGFAPTEVRRYTGGHERQKRVP Sbjct 236 LSPQIEGIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 280 >gb|AAF21592.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 481 bits (1237), Expect = 4e-134, Method: Composition-based stats. Identities = 234/304 (76%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD DHN C NT T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNNCDNT--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY K RT VTLSPQIESIWAA Sbjct 177 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYYNKIRTYVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITP GFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 237 ELGRYKLVEITPSGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAPGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21590.1| envelope glycoprotein [Simian immunodeficiency virus] Length=299 Score = 481 bits (1237), Expect = 4e-134, Method: Composition-based stats. Identities = 234/304 (76%), Positives = 251/304 (82%), Gaps = 5/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN C + + GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNNC---TTRRKGN--APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 176 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 295 Query 346 SQHL 349 SQHL Sbjct 296 SQHL 299 >pir||S46342 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN40) (fragment) gb|AAA21500.1| envelope protein Length=373 Score = 480 bits (1236), Expect = 6e-134, Method: Composition-based stats. Identities = 244/378 (64%), Positives = 280/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFALLKC D +Y GF C+NVSVV CT LMNTT+++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFALLKCRDTNYAGFGI-CNNVSVVSCTGLMNTTISSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SNDS +I LNKHY L + C RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWCH Sbjct 61 IWQKHGNSNDSVIIKLNKHYQLKIKCIRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LPKE+Y+GT + I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FQGDWKGAWKEVRETIVKLPKEKYQGTKNTTEIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DW +N+LNN ++D + N G ++ C +RTYVACHIRSV+ T+SKKT Sbjct 181 DWMVNWLNN---ESDSGKSVNVEGNTCTPEK-DRLCKKRTYVACHIRSVVNDWYTLSKKT 236 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT + L+Y KN TNVTL+ IE+++A EL RYKL+EI PIGFA Sbjct 237 YAPPREGHLECTSTVTSIIASLDYNNKNMTNVTLTANIENLYAYELGRYKLIEIKPIGFA 296 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRY G R+KRVPFV VQSQ LLAGILQQQKNLL Sbjct 297 PTEVRRYVGP-TREKRVPFVLGFLGFLGRAGAAMGATATALTVQSQQLLAGILQQQKNLL 355 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 356 AAVEQQQQMLKLTIWGVK 373 >gb|AAC59619.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 479 bits (1232), Expect = 2e-133, Method: Composition-based stats. Identities = 233/285 (81%), Positives = 247/285 (86%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS LIL NKHYNLTVTCKRPGNKT Sbjct 1 VHCTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNKHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYNLRLRQAWCHF NWKGAWKEV++E+V LPK+RYRGTN+ RI Sbjct 61 VLPVTIMAGLVFHSQKYNLRLRQAWCHFQGNWKGAWKEVRQELVKLPKDRYRGTNNTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 + QRQ+GDPE +NLWFNC GEFFY +MDWF +Y+NNLTVDADHN C +G K G R P Sbjct 121 YLQRQFGDPEASNLWFNCQGEFFYSRMDWFCHYINNLTVDADHNPC---NGQKKG--RVP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQ TYV HIRSVI TISKK YAPPREG L+C STVTGMTVELNY NRTNVT Sbjct 176 GPCVQSTYVVYHIRSVINDWYTISKKMYAPPREGTLQCMSTVTGMTVELNYRDNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIESIWAAEL RYKLVEITPIGFAPTEVRRYTGGHER KRVP Sbjct 236 LSPQIESIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERTKRVP 280 >gb|AAF21593.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 478 bits (1229), Expect = 4e-133, Method: Composition-based stats. Identities = 232/304 (76%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD+DHN C N T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDSDHNNCDNK--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I T SK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 177 HIRSIINDWYTASKFTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKR+P V VQ Sbjct 237 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRIPVVLGFLGFLAAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21594.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 478 bits (1229), Expect = 4e-133, Method: Composition-based stats. Identities = 232/304 (76%), Positives = 250/304 (82%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFSNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD+DHN C N T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDSDHNNCDNK--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I T+SK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 177 HIRSIINDWYTVSKFTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKR+P V VQ Sbjct 237 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRIPVVLGFLGFLAAAGTAMGATATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAC59615.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 473 bits (1218), Expect = 7e-132, Method: Composition-based stats. Identities = 230/285 (80%), Positives = 245/285 (85%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSY+ENRTQIWQKHR +N+S ++L NK+YNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYAENRTQIWQKHRVNNNSVIVLFNKYYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAG VFHSQKYN RLRQAWCHF NWKGAWKEVKE+I+ LPK+RYRGTN +I Sbjct 61 VLPVTIMAGRVFHSQKYNTRLRQAWCHFRGNWKGAWKEVKEKIIQLPKDRYRGTNRTDQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQWGDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVD C N + KS Sbjct 121 FLQRQWGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDRRRKPCNNNNTNKSS----- 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY +RTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNNNDRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQ+ESIWAAEL RYKLVEITPIGFAPT+VRRYTGGHERQKRVP Sbjct 236 LSPQVESIWAAELGRYKLVEITPIGFAPTDVRRYTGGHERQKRVP 280 >gb|AAF21541.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 471 bits (1212), Expect = 4e-131, Method: Composition-based stats. Identities = 231/305 (75%), Positives = 251/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFF CKMDWFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWFNCQGEFFSCKMDWFLNYINNLTVDANHNTNRCNMTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY +NRTNVTLSPQIESIWA Sbjct 178 CHIRSVVDDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQNRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLASLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAC99808.1| V2-V5 region [Simian immunodeficiency virus] Length=299 Score = 471 bits (1212), Expect = 4e-131, Method: Composition-based stats. Identities = 231/304 (75%), Positives = 251/304 (82%), Gaps = 5/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY+ENRTQIWQKHR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYTENRTQIWQKHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW EVK++IV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFQGNWRGAWNEVKQQIVKLPKDRYQGTNDTEKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNY+NNLTVDADH++CKN S K G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDADHHQCKNNS--KKG--KAPGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 177 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNTDNRTNVTLSPQIEGIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTE+RRY G RQKRVPFV VQ Sbjct 237 ELGRYKLVEITPIGFAPTEIRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 295 Query 346 SQHL 349 SQHL Sbjct 296 SQHL 299 >gb|AAF21534.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 471 bits (1211), Expect = 4e-131, Method: Composition-based stats. Identities = 231/305 (75%), Positives = 252/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWF C GEFFYCKMDWFLNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFTCQGEFFYCKMDWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAA99543.1| envelope protein gb|AAF21542.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 470 bits (1210), Expect = 7e-131, Method: Composition-based stats. Identities = 225/277 (81%), Positives = 246/277 (88%), Gaps = 4/277 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDAQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDWFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV 321 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFV 274 >gb|AAF21562.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 468 bits (1205), Expect = 2e-130, Method: Composition-based stats. Identities = 229/304 (75%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHNEC TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNECNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQ RVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQMRVPFVLGFLGFLGSPGSAMGAAATPPTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21543.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 468 bits (1204), Expect = 3e-130, Method: Composition-based stats. Identities = 228/305 (74%), Positives = 251/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSE++TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSESKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK E+V LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFSGNWRGAWEEVKREVVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDPNHNASRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21563.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 468 bits (1204), Expect = 3e-130, Method: Composition-based stats. Identities = 231/304 (75%), Positives = 248/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C N++ T G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKC-NSNNTSKG--KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21527.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 467 bits (1201), Expect = 6e-130, Method: Composition-based stats. Identities = 229/305 (75%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+ QIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKAQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIR V+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRFVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21546.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 466 bits (1199), Expect = 1e-129, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 244/304 (80%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21556.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 466 bits (1199), Expect = 1e-129, Method: Composition-based stats. Identities = 229/304 (75%), Positives = 245/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21555.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 466 bits (1198), Expect = 1e-129, Method: Composition-based stats. Identities = 230/304 (75%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNGCNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21547.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 465 bits (1196), Expect = 3e-129, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 247/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFY KMDWFLNYLNNLTVDADHN+C + + ++ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYYKMDWFLNYLNNLTVDADHNKCSSNNTSRG---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21528.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 465 bits (1196), Expect = 3e-129, Method: Composition-based stats. Identities = 229/305 (75%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGTV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVEL+Y ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELSYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG E QKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQESQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21531.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 464 bits (1194), Expect = 5e-129, Method: Composition-based stats. Identities = 226/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGN+T+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNRTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTN+ ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNEAQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLW +C G FFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWISCQGVFFYCKMDWFLNYINNLTVDPNHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFPAFLGATKTTMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21536.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 463 bits (1192), Expect = 7e-129, Method: Composition-based stats. Identities = 228/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYSQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 NLWFNC GEFFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 PNLWFNCQGEFFYCKMDWFLNYINNLTVDPNHNTNRCNKAGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYK+VE TPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKVVESTPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21551.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 463 bits (1191), Expect = 9e-129, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 245/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYL+NLTVDADH++C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLHNLTVDADHHKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21564.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 463 bits (1191), Expect = 9e-129, Method: Composition-based stats. Identities = 226/304 (74%), Positives = 243/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN +LRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTKLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21549.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 462 bits (1189), Expect = 2e-128, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFL YLNNLTVDADHN+C + K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLIYLNNLTVDADHNKCNEATKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IW+A Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWSA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21544.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 462 bits (1188), Expect = 2e-128, Method: Composition-based stats. Identities = 227/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 A LWFNC EFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 AILWFNCQEEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+S+ TYAPPREGHLEC STVTGMTV+LNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSELTYAPPREGHLECRSTVTGMTVDLNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21550.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 462 bits (1188), Expect = 2e-128, Method: Composition-based stats. Identities = 225/304 (74%), Positives = 242/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKAKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMT+ELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTIELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTNVRRYEAP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21565.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 460 bits (1183), Expect = 8e-128, Method: Composition-based stats. Identities = 224/304 (73%), Positives = 241/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKT+LPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTILPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNNCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IW A Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWPA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAP VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPPNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21561.1| envelope glycoprotein [Simian immunodeficiency virus] Length=304 Score = 460 bits (1183), Expect = 9e-128, Method: Composition-based stats. Identities = 223/282 (79%), Positives = 239/282 (84%), Gaps = 12/282 (4%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGF------APTEVRRYTGGHERQKRVPFV 321 EL RYKLVEITPIGF APT VRRY G RQKRVPFV Sbjct 236 ELGRYKLVEITPIGFAPTIVPAPTSVRRYEGP-SRQKRVPFV 276 >gb|AAC99807.1| V2-V5 region [Simian immunodeficiency virus] Length=297 Score = 459 bits (1182), Expect = 9e-128, Method: Composition-based stats. Identities = 225/304 (74%), Positives = 242/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPG KTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGTKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQK N RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSQKSNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITP+GFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPMGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21548.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 459 bits (1180), Expect = 2e-127, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 245/304 (80%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWC+F NW+GAW+EV+E+IV LPK+RY+GT D +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCNFQGNWRGAWREVREKIVKLPKDRYQGTIDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C T G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-TTKG------KAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21538.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 459 bits (1180), Expect = 2e-127, Method: Composition-based stats. Identities = 227/306 (74%), Positives = 246/306 (80%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHY LTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYTLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNARLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWFNC GEFFYCKMDWFLNY+ NLT A+H N C N G SG APGPC QRTYV Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYIYNLTEAANHITNRC-NKGGKTSG---APGPCAQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AA L RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 237 AAGLGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALT 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAF21554.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 458 bits (1179), Expect = 3e-127, Method: Composition-based stats. Identities = 230/304 (75%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C + + +K+ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNSNNTSKA---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21559.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 456 bits (1173), Expect = 1e-126, Method: Composition-based stats. Identities = 224/304 (73%), Positives = 240/304 (78%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPG KTVLPVTIMAGL Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGYKTVLPVTIMAGLA 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAW HF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWRHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHNEC TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNECNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT RRY G +QKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNGRRYEGP-SKQKRVPFVLGFLGFLGAAGTTMGAATTALAVQ 294 Query 346 SQHL 349 QHL Sbjct 295 YQHL 298 >gb|AAF21529.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 456 bits (1172), Expect = 2e-126, Method: Composition-based stats. Identities = 224/305 (73%), Positives = 247/305 (80%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQ+HR +NDS LILLNKHYNLTVTCKRPGNKT+LP+TIM +V Sbjct 1 STGLLLNGSYSENKTQIWQEHRVNNDSVLILLNKHYNLTVTCKRPGNKTLLPLTIMPAMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GT D ++I+ QRQ GDPE Sbjct 61 FHSQKYNTRLRQAWCHFTGNWRGAWEEVKREIVTLPKDRYQGTYDTQKIYLQRQLGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLW NC GEFFYCKM+WFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWLNCQGEFFYCKMEWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21540.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 456 bits (1172), Expect = 2e-126, Method: Composition-based stats. Identities = 226/306 (73%), Positives = 248/306 (81%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWF C GEF CKMDWFLNY+NNLTVDA+H N C N +G SG APGPCVQRTYV Sbjct 121 ANLWFTCQGEFSSCKMDWFLNYINNLTVDANHTTNRC-NKAGKTSG---APGPCVQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 A HIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ASHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVEITPIGFAPTEVRRYTGG +R +RVPFV Sbjct 237 AAELGRYKLVEITPIGFAPTEVRRYTGGQDRHERVPFVLGFLTFLGAAVTAMGAAATALT 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAF21560.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 454 bits (1168), Expect = 4e-126, Method: Composition-based stats. Identities = 222/304 (73%), Positives = 240/304 (78%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR NDS ++L KHYNLTV C+R GNKTVLPVT MAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVINDSVIVLFTKHYNLTVICRRSGNKTVLPVTTMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLR+AWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRKAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C + +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-------TSKGKAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21532.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 454 bits (1167), Expect = 5e-126, Method: Composition-based stats. Identities = 226/305 (74%), Positives = 247/305 (80%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTN ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNGTQKIYLQRQFGDPEV 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEF CKMDWFLNY+N LTVDA+HN + NT+G SG APGPCVQ TYVA Sbjct 121 ANLWFNCQGEFSSCKMDWFLNYINILTVDANHNTNRCNTTGKTSG---APGPCVQGTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TY PPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYPPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAC99809.1| V2-V5 region [Simian immunodeficiency virus] Length=300 Score = 453 bits (1165), Expect = 1e-125, Method: Composition-based stats. Identities = 220/304 (72%), Positives = 246/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQ+WQKHR +NDS +IL NKHYNLT TC RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQVWQKHRVNNDSVIILFNKHYNLTATCGRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVKEEI+ LP++R++GT D KRIF QRQ+GDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKEEIIKLPQDRFQGTTDTKRIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNCHGEFF+CK+DWF NYLNNLT + DHN+C++ + S N+RAPGP VQRTYVAC Sbjct 121 ANLWFNCHGEFFFCKLDWFPNYLNNLTGNPDHNKCEHNN---SSNRRAPGPRVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI +I+K+TYAPPREGHL+CTS VTGMTVEL Y KNRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYSITKRTYAPPREGHLQCTSPVTGMTVELIYNTKNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT+VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTDVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAC99810.1| V2-V5 region [Simian immunodeficiency virus] Length=300 Score = 451 bits (1161), Expect = 3e-125, Method: Composition-based stats. Identities = 220/304 (72%), Positives = 241/304 (79%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQK+ SNDS LIL NKHYNLTVTC+RPGNKT LPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQKNGNSNDSVLILFNKHYNLTVTCRRPGNKTALPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKY RLRQAWCHF NW+GAW+EV+++++ LP + Y+GT + +RI+ QR++GDPE Sbjct 61 FHSQKYYTRLRQAWCHFQGNWEGAWREVQKKLIGLPTDNYQGTINTERIYLQREFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLW C GEF YCKMDW LNY+NNLTVDADHN C+NTS APGPCVQRTYVAC Sbjct 121 DNLWSTCQGEFLYCKMDWLLNYINNLTVDADHNRCQNTSDKGP----APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI T+SKKTYAPPREGHLECTSTVTGMTVELNY KNRTNVTLSPQI+ IWAA Sbjct 177 HIRSVINDWYTVSKKTYAPPREGHLECTSTVTGMTVELNYNNKNRTNVTLSPQIDGIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRYTGGHERQKR PFV VQ Sbjct 237 ELGRYKLVEITPIGFAPTNVRRYTGGHERQKRAPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21557.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 451 bits (1160), Expect = 3e-125, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 246/304 (80%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHY LTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYILTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C T+ G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-----TRKG--KAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21552.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 451 bits (1159), Expect = 4e-125, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 246/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+G PE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGHPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFY KMDWFLNYLNNLTVDADHN+C +++ +K +APGPCV RTYVAC Sbjct 121 ANLWFNCQGEFFYYKMDWFLNYLNNLTVDADHNKCDSSNTSKG---KAPGPCVHRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21558.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 447 bits (1149), Expect = 7e-124, Method: Composition-based stats. Identities = 223/304 (73%), Positives = 244/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GT D +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTTDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNL VDADHN+C + + ++ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLPVDADHNQCSSNNTSRG---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPR GHL+CTSTVTGMTVELNY NRTNVTLSPQIE IW A Sbjct 178 HIRSVINDWYTISKKTYAPPRGGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWPA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21553.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 443 bits (1140), Expect = 7e-123, Method: Composition-based stats. Identities = 223/305 (73%), Positives = 239/305 (78%), Gaps = 8/305 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYHGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMD-WFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMD WFLNYLNN VDADHN C T+ N +APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDVWFLNYLNN-PVDADHNVCNKTT-----NGKAPGPCVQRTYVA 174 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHI +VI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IW Sbjct 175 CHISTVINDWCTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWP 234 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITP GFAPT VRRY G RQKRVPFV V Sbjct 235 AELGRYKLVEITPSGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTV 293 Query 345 QSQHL 349 QSQHL Sbjct 294 QSQHL 298 >gb|AAF21526.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 441 bits (1135), Expect = 3e-122, Method: Composition-based stats. Identities = 221/306 (72%), Positives = 243/306 (79%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LP++RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVTLPQDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWF GEFF C+MDW NY+ L DA+H N C N +G SG APGPCVQRTYV Sbjct 121 ANLWFKRQGEFFSCEMDWVPNYIYILRADANHTTNRC-NKTGKTSG---APGPCVQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLEFRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 237 AAELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALA 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAX09393.1| envelope glycoprotein [Simian immunodeficiency virus] Length=249 Score = 441 bits (1134), Expect = 3e-122, Method: Composition-based stats. Identities = 214/253 (84%), Positives = 227/253 (89%), Gaps = 4/253 (1%) Query 37 CTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVL 96 CT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS L+L NK+YNLTVTCKRPGNKTVL Sbjct 1 CTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLVLFNKYYNLTVTCKRPGNKTVL 60 Query 97 PVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFF 156 PVTIMAGLVFHSQKYN+RLRQAWCHF NWKGAWKEVK+E+V LPK+RY+GTND ++IF Sbjct 61 PVTIMAGLVFHSQKYNMRLRQAWCHFQGNWKGAWKEVKQELVKLPKDRYQGTNDTEKIFL 120 Query 157 QRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGP 216 QRQ+GDPE ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C +T K GN APGP Sbjct 121 QRQFGDPEAANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNSCNSTK--KGGN--APGP 176 Query 217 CVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLS 276 CVQRTYVACHIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNYI NRTNVTLS Sbjct 177 CVQRTYVACHIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYIKNNRTNVTLS 236 Query 277 PQIESIWAAELDR 289 PQIESIWAAEL R Sbjct 237 PQIESIWAAELGR 249 >gb|AAX09392.1| envelope glycoprotein [Simian immunodeficiency virus] Length=314 Score = 432 bits (1110), Expect = 2e-119, Method: Composition-based stats. Identities = 212/315 (67%), Positives = 245/315 (77%), Gaps = 11/315 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D +Y G +C+NVSV CT L+NTTV+TG+ +NGSY+ENRT+ Sbjct 11 FRLRYCAPAGYALLRCRDKNYTG-SNDCTNVSVSACTRLINTTVSTGIGINGSYTENRTE 69 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SNDS +I LN++YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +L+QAWC Sbjct 70 IWQEDGNSNDSVIIRLNRYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLKQAWCW 129 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+ AW+EVKEEIV LP RY+GTND +I+ QRQWGDPE +FNC GEFFYCKM Sbjct 130 FGGKWRQAWQEVKEEIVKLPPARYQGTNDTSKIYLQRQWGDPEAEFFFFNCQGEFFYCKM 189 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN+C T+ K C QRTYV CHIR V+ T+SKKT Sbjct 190 DWFLNYLNNQSVDPDHNKCNKTNDKK---------CWQRTYVPCHIRQVVNDWYTLSKKT 240 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREG LEC ST T + VE+NY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 241 YAPPREGQLECNSTATALYVEINYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 300 Query 302 PTEVRRYTGGHERQK 316 PT+VRRYTG ERQK Sbjct 301 PTDVRRYTGP-ERQK 314 >gb|AAF21530.1| envelope glycoprotein [Simian immunodeficiency virus] Length=303 Score = 427 bits (1099), Expect = 4e-118, Method: Composition-based stats. Identities = 215/306 (70%), Positives = 236/306 (77%), Gaps = 5/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMA-GL 104 +TGLLL GSYSEN+TQIWQ+HR +NDS LILLNKH+NLTVTC RPGNKT L G+ Sbjct 1 STGLLLIGSYSENKTQIWQEHRVNNDSVLILLNKHHNLTVTCMRPGNKTTLACHYHGPGM 60 Query 105 VFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPE 164 VFHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 VFHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPE 120 Query 165 TANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYV 223 ANLWFNC GEFF CKMDWFLNY+ LTVDA+HN + T+G SG APGPCVQRTYV Sbjct 121 AANLWFNCQGEFFSCKMDWFLNYIYTLTVDANHNTNRCTTTGKTSG---APGPCVQRTYV 177 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T K TY PPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 178 ACHIRSVVNDWYTDKKLTYPPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 237 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVE TPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 238 AAELGRYKLVEFTPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGTTGTPMGAAATALT 297 Query 344 VQSQHL 349 VQSQHL Sbjct 298 VQSQHL 303 >gb|AAA47593.1| glycoprotein 120 Length=486 Score = 421 bits (1081), Expect = 6e-116, Method: Composition-based stats. Identities = 207/311 (66%), Positives = 241/311 (77%), Gaps = 10/311 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPA A+LKC D +Y GF T C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 180 LRLRYCAPAAVAILKCKDTNYTGFGT-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 238 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SNDS +I LNKHYNLT+ C+RPGNKTVLPVTIMAG+VFHSQKYN +LRQAWCH Sbjct 239 IWQKHGVSNDSVIIKLNKHYNLTILCRRPGNKTVLPVTIMAGMVFHSQKYNTKLRQAWCH 298 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LPK +Y+GTND K+I+ +RQWGDPE A++WFNC GEFFYC Sbjct 299 FQGDWKGAWKEVRETIVKLPKHKYQGTNDTKKIWLRRQWGDPEAASIWFNCLGEFFYCTP 358 Query 182 DWFLNYLNNLT-----VDADHNECKN-TSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLE 235 DWFLNYLNN + D + N C N TSG +G+ R C++RTYV HIRSV+ Sbjct 359 DWFLNYLNNESSEGSFTDVEGNRCSNITSGGLTGSTRK---CLKRTYVGLHIRSVVNDWY 415 Query 236 TISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEI 295 T+ +K YAPPREGHLEC STVT M V L+Y KN TNVTL+ +E+IWA EL RYKL+EI Sbjct 416 TLLQKRYAPPREGHLECRSTVTSMLVSLDYNDKNMTNVTLTANLENIWAYELGRYKLIEI 475 Query 296 TPIGFAPTEVR 306 PIGFAPTEVR Sbjct 476 KPIGFAPTEVR 486 >gb|AAF21537.1| envelope glycoprotein [Simian immunodeficiency virus] Length=257 Score = 393 bits (1009), Expect = 1e-107, Method: Composition-based stats. Identities = 194/250 (77%), Positives = 212/250 (84%), Gaps = 6/250 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV PK+RY+GTND ++I+ RQ GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKSPKDRYQGTNDTQKIYLHRQVGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLW NC GEFFYCKMDW LNY+NNLTVDA+H N C N G SG APGPC QRTYV Sbjct 121 ANLWINCQGEFFYCKMDWPLNYINNLTVDANHDANRC-NEGGKTSG---APGPCAQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLV 293 AAEL RYKLV Sbjct 237 AAELGRYKLV 246 >gb|AAF21545.1| envelope glycoprotein [Simian immunodeficiency virus] Length=252 Score = 374 bits (959), Expect = 8e-102, Method: Composition-based stats. Identities = 181/254 (71%), Positives = 199/254 (78%), Gaps = 2/254 (0%) Query 96 LPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIF 155 +PVTIMAG+VFHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ Sbjct 1 MPVTIMAGMVFHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIY 60 Query 156 FQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPG 215 QRQ+GDPE ANLWFNC GEFFYCKMDW LNY+NNLTVD +HN + G K+ APG Sbjct 61 LQRQFGDPEAANLWFNCQGEFFYCKMDWLLNYINNLTVDPNHNANRCNKGGKTSG--APG 118 Query 216 PCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTL 275 PCVQRTYVACHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTL Sbjct 119 PCVQRTYVACHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTL 178 Query 276 SPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXX 335 SPQIESIWAAEL YKLVEITPIGFAPTEVRRYTGG E QKRVPFV Sbjct 179 SPQIESIWAAELGGYKLVEITPIGFAPTEVRRYTGGQESQKRVPFVLGFLAFLGAAGTAM 238 Query 336 XXXXXXXXVQSQHL 349 VQSQHL Sbjct 239 GAAATALTVQSQHL 252 >dbj|BAA82439.1| envelope glycoprotein [Simian immunodeficiency virus - agm] Length=214 Score = 370 bits (950), Expect = 8e-101, Method: Composition-based stats. Identities = 176/217 (81%), Positives = 189/217 (87%), Gaps = 3/217 (1%) Query 87 CKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYR 146 C+RPGNKTVLPVTIMAGLV HSQKYN RLRQAWCHF NW+GAW+EV+E+IV LPKERY+ Sbjct 1 CRRPGNKTVLPVTIMAGLVIHSQKYNTRLRQAWCHFQGNWRGAWREVREKIVQLPKERYQ 60 Query 147 GTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGT 206 GTND +I+ QRQWGDPE ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C NT Sbjct 61 GTNDTSQIYLQRQWGDPEAANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNVCNNTGKK 120 Query 207 KSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYI 266 KS +APGPC QRTYVACHIRSV+ T+SK TYAPPREGHL+CTSTVT M VELNY Sbjct 121 KS---KAPGPCAQRTYVACHIRSVVNDWYTLSKLTYAPPREGHLQCTSTVTIMAVELNYN 177 Query 267 PKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFAPT 303 PKNRTNVTLSPQIE+IWAAEL RYKLVEITPIGFAPT Sbjct 178 PKNRTNVTLSPQIENIWAAELGRYKLVEITPIGFAPT 214 >dbj|BAA82408.1| env of SIVagm [Simian immunodeficiency virus - agm] Length=212 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 171/217 (78%), Positives = 188/217 (86%), Gaps = 5/217 (2%) Query 87 CKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYR 146 C+RPGNKTVLPVTIMAGLVFH QKYN RLRQAWCHF NW+GAW+EV+++IV LPKERY+ Sbjct 1 CRRPGNKTVLPVTIMAGLVFHFQKYNNRLRQAWCHFQDNWRGAWREVRKKIVQLPKERYQ 60 Query 147 GTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGT 206 GTND +I QRQWGDPE ANLWFNC G+FFYCK+DWFLNYLNNLTVDADHN C +T Sbjct 61 GTNDTSQIHLQRQWGDPEAANLWFNCQGKFFYCKLDWFLNYLNNLTVDADHNPCNSTRKG 120 Query 207 KSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYI 266 K APGPCVQRTYVACHIRSV+ T+SK TYAPPREGHL+C+STVTGMTVELNY Sbjct 121 K-----APGPCVQRTYVACHIRSVVNDWYTLSKLTYAPPREGHLQCSSTVTGMTVELNYN 175 Query 267 PKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFAPT 303 KNRTNVTLSPQIE+IWAAEL RYKLV+ITPIGFAPT Sbjct 176 SKNRTNVTLSPQIENIWAAELGRYKLVKITPIGFAPT 212 >gb|AAT41729.1| Env [Simian immunodeficiency virus] Length=737 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 181/379 (47%), Positives = 238/379 (62%), Gaps = 16/379 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T + NG+ +ENRT Sbjct 229 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWVGFNGTRAENRTY 288 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GL+FHSQ N R +QAWC Sbjct 289 IYWHSRS--NRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLIFHSQSINKRPKQAWCW 346 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +W+GA +EVKE IV P RY GTN+ K I + GDPE +W NC GEF YCK Sbjct 347 FGGSWRGAIQEVKETIVKHP--RYTGTNNTKYINLTAPRGGDPEVTFMWTNCRGEFLYCK 404 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NTSG+ ++ +R YV CHIR +I + K Sbjct 405 MNWFLNWV----------EDRNTSGSL-WTEQTKAEQQKRNYVPCHIRQIINTWHRVGKN 453 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N+TN+++S ++ ++ EL YKLVEITPIG Sbjct 454 VYLPPREGDLTCNSTVTSLIADIDWIDGNQTNISMSAEVAELYRLELGDYKLVEITPIGL 513 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT +RRYT G R KR FV QS+ LLAGI+QQQ+ L Sbjct 514 APTSIRRYTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQL 573 Query 361 LAAVEAQQQMLKLTIWGVK 379 L V+ QQ++L+LT+WG K Sbjct 574 LDVVKRQQELLRLTVWGTK 592 >gb|AAP46095.1| envelope glycoprotein [Simian immunodeficiency virus] Length=875 Score = 331 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 186/380 (48%), Positives = 230/380 (60%), Gaps = 26/380 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGNWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLN++ E +NT+ K +R YV CHIR +I + K Sbjct 404 MDWFLNWV----------EDRNTTKQKP----------KRNYVPCHIRQIINTWHKVGKN 443 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I NRTN+T+S ++ ++ EL YKLVEITPIG Sbjct 444 VYLPPREGDLACNSTVTSLIANIDWIDGNRTNITMSAEVAELYRLELGDYKLVEITPIGL 503 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY TGG R KR FV QS+ LLAGI QQQ+ Sbjct 504 APTSVRRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIGQQQQQ 563 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 564 LLDVVKRQQELLRLTVWGTK 583 >gb|AAC68662.1| Env [Simian immunodeficiency virus] Length=885 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 185/385 (48%), Positives = 237/385 (61%), Gaps = 28/385 (7%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 233 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 292 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GL+FHSQ N R +QAWC Sbjct 293 IYWHSRS--NRTIISLNKYYNLTIRCRRPGNKTVLPVTIMSGLIFHSQPINERPKQAWCW 350 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F +W+ A +EVKE IV P RY GTN+ K+I G DPE +W NC GEF YCK Sbjct 351 FGGSWREAIQEVKETIVKHP--RYTGTNETKKINLTAPGGGDPEVTFMWTNCRGEFLYCK 408 Query 181 MDWFLNYLNNLTVDADHNECKNTSG------TKSGNKRAPGPCVQRTYVACHIRSVIIWL 234 M+WFLN++ E +NTSG TK+ K+ R YV CHIR +I Sbjct 409 MNWFLNWV----------EDRNTSGSLWTQQTKADEKK-------RNYVPCHIRQIINTW 451 Query 235 ETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVE 294 + K Y PPREG L C STVT + ++++I N+TN+T+S ++ ++ EL YKLVE Sbjct 452 HRVGKNVYLPPREGDLTCNSTVTSLIADIDWIDGNQTNITMSAEVAELYRLELGDYKLVE 511 Query 295 ITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGIL 354 ITPIG APT VRRYT G R KR FV QS+ LLAGI+ Sbjct 512 ITPIGLAPTSVRRYTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTRSAQSRTLLAGIV 571 Query 355 QQQKNLLAAVEAQQQMLKLTIWGVK 379 QQQ+ LL V+ QQ++L+LT+WG K Sbjct 572 QQQQQLLDVVKRQQELLRLTVWGTK 596 >gb|AAK64201.1| env protein [Simian immunodeficiency virus 17E-Cl] Length=879 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ+ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQAWCW 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTN+ +I + GDPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + K Sbjct 404 MNWFLNWV----------EDRNTANQK------PKEQHKRNYVPCHIRQIINTWHKVGKN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTDVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAO67286.1| envelope glycoprotein [Simian immunodeficiency virus] Length=887 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 234/380 (61%), Gaps = 17/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 231 IRFRYCAPPGYALLRCNDSNYSGFAPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 290 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ H SN + +I LNK+YNLT+ CKRPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 291 IYW-HGNSNRT-IITLNKYYNLTIKCKRPGNKTVLPVTIMSGLVFHSQTINTRPKQAWCW 348 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F NW A +EVKE +V P RY GTND ++I G+PE +W NC GEF YCK Sbjct 349 FEGNWSKAIQEVKETLVKHP--RYTGTNDTRKINLTAPARGNPEVTFMWTNCRGEFLYCK 406 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ D D N + +S K+ R YV CHIR +I + K Sbjct 407 MNWFLNWVE----DRDQNSNRWKQQKESEQKK-------RNYVPCHIRQIINTWHKVGKN 455 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N TN+T+S ++ ++ EL YKLVEITPIG Sbjct 456 VYLPPREGDLTCNSTVTSLIAKIDWINNNETNITMSAEVAELYRLELGDYKLVEITPIGL 515 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+VRRY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 516 APTDVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQ 575 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 576 LLDVVKRQQELLRLTVWGTK 595 >gb|AAP46096.1| envelope glycoprotein [Simian immunodeficiency virus] Length=873 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 230/380 (60%), Gaps = 26/380 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 226 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 285 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 286 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 343 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GT D +I G DPE +W NC GEF YCK Sbjct 344 FGGNWKDAIKEVKQTIVKHP--RYTGTKDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 401 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLN++ E +NT+ K +R YV CHIR +I + K Sbjct 402 MDWFLNWV----------EDRNTTKQKP----------KRNYVPCHIRQIINTWHKVGKN 441 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 442 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 501 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 502 APTSVRRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 561 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 562 LLDVVKRQQELLRLTVWGTK 581 >gb|AAA91937.1| env protein Length=880 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 20/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ + ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYW--HSKDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTN+ +I G DPE +W NC GEF YCK Sbjct 346 FEGNWKEAIKEVKQTIVKHP--RYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E KN +GT + P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDKNLTGTT----QKPQERHKRNYVPCHIRQIINTWHKVGRN 449 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 450 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 509 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 510 APTNVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 569 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 570 LLDVVKRQQELLRLTVWGTK 589 >gb|AAV69864.1| envelope glycoprotein [SIV vector pCLN8] Length=735 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 20/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ + ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYW--HSKDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTN+ +I G DPE +W NC GEF YCK Sbjct 346 FEGNWKEAIKEVKQTIVKHP--RYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E KN +GT + P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDKNLTGTT----QKPQERHKRNYVPCHIRQIINTWHKVGRN 449 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 450 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 509 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 510 APTNVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 569 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 570 LLDVVKRQQELLRLTVWGTK 589 >gb|AAZ52606.1| envelope glycoprotein [Simian immunodeficiency virus SIVmac] Length=879 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 231/380 (60%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R RQAWC Sbjct 288 IYWHGR--DNGTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPRQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDRNTTNQK------PNEQHKRNYVPCHIRQIINTWHKVGRN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTHVKRYTTGGTSRNKRGVFVLGSLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAX85828.2| envelope glycoprotein [Simian immunodeficiency virus] Length=886 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 187/382 (48%), Positives = 236/382 (61%), Gaps = 21/382 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 230 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 289 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 290 IYWHGRS--NRTIISLNKFYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 347 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +WK A +EVKE IV P RY GTND K+I + GDPE +W NC GEF YCK Sbjct 348 FGGSWKKAIQEVKETIVKHP--RYTGTNDTKKINLTAPRGGDPEVTFMWTNCRGEFLYCK 405 Query 181 MDWFLNYLNNLTVDADHNECKNTSGT--KSGNKRAPGPCVQRTYVACHIRSVIIWLETIS 238 M+WFLN++ E ++T+G K N+ G +R YV CHIR +I + Sbjct 406 MNWFLNWV----------EDRDTNGNIWKQQNR---GEQQKRNYVPCHIRQIINTWHKVG 452 Query 239 KKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPI 298 K Y PPREG L C STVT + +++I NRTN+T+S ++ ++ EL YKLVEITPI Sbjct 453 KNVYLPPREGDLTCNSTVTSLIANIDWIDGNRTNITMSAEVAELYRLELGDYKLVEITPI 512 Query 299 GFAPTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQ 357 G APT VRRY T G R KR FV QS+ LLAGI+QQQ Sbjct 513 GLAPTNVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQ 572 Query 358 KNLLAAVEAQQQMLKLTIWGVK 379 + LL V+ QQ++L+LT+WG K Sbjct 573 QQLLDVVKRQQELLRLTVWGTK 594 >gb|AAK64192.1| truncated envelope glycoprotein [Simian immunodeficiency virus 17E-Fr] Length=763 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ+ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQAWCW 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTN+ +I + GDPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + K Sbjct 404 MNWFLNWV----------EDRNTANQK------PKEQHKRNYVPCHIRQIINTWHKVGKN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTDVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAA47765.1| envelope polyprotein Length=773 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 235/380 (61%), Gaps = 18/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF NC+ V V CT +M T +T NG+ +ENRT Sbjct 236 IRFRYCAPPGYALLRCNDSNYSGFAPNCTKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 295 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 296 IYWHGRS--NRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 353 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A +EVKE +V P RY GTND K+I G DPE ++W NC GEF YCK Sbjct 354 FGGEWKKAIQEVKETLVKHP--RYTGTNDTKQIKLTAPGGGDPEVTHMWTNCRGEFLYCK 411 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ ++ KN S S N++ +R YV CHIR +I + K Sbjct 412 MNWFLNWVEDI---------KNGSRWTSQNQKERQ---RRNYVPCHIRQIINTWHKVGKN 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + E+++I N TN+T+S ++ ++ EL YKLVEITPI F Sbjct 460 VYLPPREGDLTCNSTVTSLIAEIDWINGNETNITMSAEVAQLYRLELGDYKLVEITPIAF 519 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 520 APTSVKRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTLSAQSRTLLAGIVQQQQQ 579 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V QQ++L+LT+WG K Sbjct 580 LLDVVTRQQELLRLTVWGTK 599 >gb|AAA47773.1| envelope polyprotein Length=773 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 235/380 (61%), Gaps = 18/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF NC+ V V CT +M T +T NG+ +ENRT Sbjct 236 IRFRYCAPPGYALLRCNDSNYSGFAPNCTKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 295 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 296 IYWHGRS--NRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 353 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A +EVKE +V P RY GTND K+I G DPE ++W NC GEF YCK Sbjct 354 FGGEWKKAIQEVKETLVKHP--RYTGTNDTKQIKLTAPGGGDPEVTHMWTNCRGEFLYCK 411 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ ++ KN S S N++ +R YV CHIR +I + K Sbjct 412 MNWFLNWVEDI---------KNGSRWTSQNQKERQ---RRNYVPCHIRQIINTWHKVGKN 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + E+++I N TN+T+S ++ ++ EL YKLVEITPI F Sbjct 460 VYLPPREGDLTCNSTVTSLIAEIDWINGNETNITMSAEVAQLYRLELGDYKLVEITPIAF 519 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 520 APTSVKRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTLSAQSRTLLAGIVQQQQQ 579 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V QQ++L+LT+WG K Sbjct 580 LLDVVTRQQELLRLTVWGTK 599 >gb|AAX85833.2| envelope glycoprotein [Simian immunodeficiency virus] Length=857 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 185/383 (48%), Positives = 237/383 (61%), Gaps = 23/383 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 232 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 291 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 292 IYWHGRS--NRTIISLNKFYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 349 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +WK A +EVKE IV P RY GTND K+I + GDPE +W NC GEF YCK Sbjct 350 FGGSWKKAIQEVKETIVKHP--RYTGTNDTKKINLTAPRGGDPEVTFMWTNCRGEFLYCK 407 Query 181 MDWFLNYLNNLTVDADHNECKNTSGT---KSGNKRAPGPCVQRTYVACHIRSVIIWLETI 237 M+WFLN++ E ++T+GT + NK +R YV CHIR ++ + Sbjct 408 MNWFLNWV----------EDRDTNGTIWKQQNNKEQQ----KRNYVPCHIRQIVNTWHKV 453 Query 238 SKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITP 297 K Y PPREG L C STVT + ++++I N+TN+T+S ++ ++ EL YKLVEITP Sbjct 454 GKNVYLPPREGDLTCNSTVTSLIADIDWIDNNQTNITMSAEVAELYRLELGDYKLVEITP 513 Query 298 IGFAPTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQ 356 IG APT VRRY T G R KR FV QS+ LLAGI+QQ Sbjct 514 IGLAPTSVRRYTTTGAPRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQ 573 Query 357 QKNLLAAVEAQQQMLKLTIWGVK 379 Q+ LL V+ QQ++L+LT+WG K Sbjct 574 QQQLLDVVKRQQELLRLTVWGTK 596 >gb|AAZ52607.1| envelope glycoprotein [Simian immunodeficiency virus SIVmac] Length=879 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 232/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPRQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDRNTTNQK------PNEQHKRNYVPCHIRQIINTRHKVGRN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV X QS+ LLAGI+QQQ+ Sbjct 508 APTHVKRYTTGGTSRNKRGVFVLGFXGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAO67291.1| envelope glycoprotein [Simian immunodeficiency virus] Length=887 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 233/380 (61%), Gaps = 17/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 231 IRFRYCAPPGYALLRCNDSNYSGFAPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 290 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ H SN + +I LNK+YNLT+ CKRPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 291 IYW-HGNSNRT-IISLNKYYNLTIRCKRPGNKTVLPVTIMSGLVFHSQTINTRPKQAWCW 348 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F NW A +EVKE +V P RY GTND ++I G+PE +W NC GEF YCK Sbjct 349 FEGNWSKAIQEVKETLVKHP--RYTGTNDTRKINLTAPARGNPEVTFMWTNCRGEFLYCK 406 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ D D N + +S K+ R YV CHIR +I + K Sbjct 407 MNWFLNWVE----DRDQNSNRWKQQKESEQKK-------RNYVPCHIRQIINAWHKVGKN 455 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N TN+T+S ++ ++ EL YKLVEITPIG Sbjct 456 VYLPPREGDLTCNSTVTSLIAKIDWINNNETNITMSAEVAELYRLELGDYKLVEITPIGL 515 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 516 APTNVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQ 575 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 576 LLDVVKRQQELLRLTVWGTK 595 Query= gi|222222|pir|TVFV2E|TVFV2E envelope protein Length=379 Score E Sequences producing significant alignments: (Bits) Value gb|AAA99542.1| envelope protein 702 0.0 gb|AAA99544.1| envelope protein 635 1e-180 sp|P27977|ENV_SIVVG Envelope glycoprotein gp160 precursor (En... 619 2e-175 pir||S46345 env polyprotein - simian immunodeficiency virus S... 617 5e-175 dbj|BAF32565.1| env polyprotein [Simian immunodeficiency virus] 610 3e-173 sp|P27757|ENV_SIVV1 Envelope glycoprotein gp160 precursor (En... 609 8e-173 gb|AAC99812.1| V2-gp41 junction [Simian immunodeficiency virus] 608 2e-172 gb|AAA64263.1| envelope 605 2e-171 sp|P05886|ENV_SIVVT Envelope glycoprotein gp160 precursor (En... 602 2e-170 pir||S46344 env polyprotein - simian immunodeficiency virus S... 588 2e-166 pir||S46352 env polyprotein - simian immunodeficiency virus S... 509 1e-142 pir||S46338 env polyprotein - simian immunodeficiency virus S... 508 2e-142 pir||S46341 env polyprotein - simian immunodeficiency virus S... 503 8e-141 gb|AAC33802.1| envelope glycoprotein [Simian immunodeficiency vi 501 2e-140 pir||S46343 env polyprotein - simian immunodeficiency virus S... 500 7e-140 gb|AAC33803.1| envelope glycoprotein [Simian immunodeficiency vi 499 1e-139 pir||S46337 env polyprotein - simian immunodeficiency virus S... 498 3e-139 pir||S46339 env polyprotein - simian immunodeficiency virus S... 493 8e-138 gb|AAC59620.1| envelope glycoprotein [Simian immunodeficiency vi 492 2e-137 gb|AAC99811.1| V2-V5 region [Simian immunodeficiency virus] >... 490 6e-137 gb|AAC59617.1| envelope glycoprotein [Simian immunodeficiency vi 489 1e-136 ref|NP_054372.1| envelope protein [Simian immunodeficiency vi... 486 7e-136 pir||S46335 env polyprotein - simian immunodeficiency virus S... 486 1e-135 gb|AAC59616.1| envelope glycoprotein [Simian immunodeficiency vi 485 2e-135 gb|AAF21588.1| envelope glycoprotein [Simian immunodeficiency vi 485 2e-135 gb|AAC59621.1| envelope glycoprotein [Simian immunodeficiency vi 484 3e-135 pir||S46340 env polyprotein - simian immunodeficiency virus S... 484 3e-135 pir||S46336 env polyprotein - simian immunodeficiency virus S... 484 4e-135 gb|AAC57057.1| envelope glycoprotein [Simian immunodeficiency... 484 5e-135 gb|AAF21595.1| envelope glycoprotein [Simian immunodeficiency vi 483 7e-135 gb|AAC59618.1| envelope glycoprotein [Simian immunodeficiency vi 481 3e-134 gb|AAF21592.1| envelope glycoprotein [Simian immunodeficiency vi 481 4e-134 gb|AAF21590.1| envelope glycoprotein [Simian immunodeficiency vi 481 4e-134 pir||S46342 env polyprotein - simian immunodeficiency virus S... 480 6e-134 gb|AAC59619.1| envelope glycoprotein [Simian immunodeficiency vi 479 2e-133 gb|AAF21593.1| envelope glycoprotein [Simian immunodeficiency vi 478 4e-133 gb|AAF21594.1| envelope glycoprotein [Simian immunodeficiency vi 478 4e-133 gb|AAC59615.1| envelope glycoprotein [Simian immunodeficiency vi 473 7e-132 gb|AAF21541.1| envelope glycoprotein [Simian immunodeficiency vi 471 4e-131 gb|AAC99808.1| V2-V5 region [Simian immunodeficiency virus] 471 4e-131 gb|AAF21534.1| envelope glycoprotein [Simian immunodeficiency vi 471 4e-131 gb|AAA99543.1| envelope protein >gb|AAF21542.1| envelope glyc... 470 7e-131 gb|AAF21562.1| envelope glycoprotein [Simian immunodeficiency vi 468 2e-130 gb|AAF21543.1| envelope glycoprotein [Simian immunodeficiency vi 468 3e-130 gb|AAF21563.1| envelope glycoprotein [Simian immunodeficiency vi 468 3e-130 gb|AAF21527.1| envelope glycoprotein [Simian immunodeficiency vi 467 6e-130 gb|AAF21546.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21556.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21555.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21547.1| envelope glycoprotein [Simian immunodeficiency vi 465 3e-129 gb|AAF21528.1| envelope glycoprotein [Simian immunodeficiency vi 465 3e-129 gb|AAF21531.1| envelope glycoprotein [Simian immunodeficiency vi 464 5e-129 gb|AAF21536.1| envelope glycoprotein [Simian immunodeficiency vi 463 7e-129 gb|AAF21551.1| envelope glycoprotein [Simian immunodeficiency vi 463 9e-129 gb|AAF21564.1| envelope glycoprotein [Simian immunodeficiency vi 463 9e-129 gb|AAF21549.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21544.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21550.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21565.1| envelope glycoprotein [Simian immunodeficiency vi 460 8e-128 gb|AAF21561.1| envelope glycoprotein [Simian immunodeficiency vi 460 9e-128 gb|AAC99807.1| V2-V5 region [Simian immunodeficiency virus] 459 9e-128 gb|AAF21548.1| envelope glycoprotein [Simian immunodeficiency vi 459 2e-127 gb|AAF21538.1| envelope glycoprotein [Simian immunodeficiency vi 459 2e-127 gb|AAF21554.1| envelope glycoprotein [Simian immunodeficiency vi 458 3e-127 gb|AAF21559.1| envelope glycoprotein [Simian immunodeficiency vi 456 1e-126 gb|AAF21529.1| envelope glycoprotein [Simian immunodeficiency vi 456 2e-126 gb|AAF21540.1| envelope glycoprotein [Simian immunodeficiency vi 456 2e-126 gb|AAF21560.1| envelope glycoprotein [Simian immunodeficiency vi 454 4e-126 gb|AAF21532.1| envelope glycoprotein [Simian immunodeficiency vi 454 5e-126 gb|AAC99809.1| V2-V5 region [Simian immunodeficiency virus] 453 1e-125 gb|AAC99810.1| V2-V5 region [Simian immunodeficiency virus] 451 3e-125 gb|AAF21557.1| envelope glycoprotein [Simian immunodeficiency vi 451 3e-125 gb|AAF21552.1| envelope glycoprotein [Simian immunodeficiency vi 451 4e-125 gb|AAF21558.1| envelope glycoprotein [Simian immunodeficiency vi 447 7e-124 gb|AAF21553.1| envelope glycoprotein [Simian immunodeficiency vi 443 7e-123 gb|AAF21526.1| envelope glycoprotein [Simian immunodeficiency vi 441 3e-122 gb|AAX09393.1| envelope glycoprotein [Simian immunodeficiency vi 441 3e-122 gb|AAX09392.1| envelope glycoprotein [Simian immunodeficiency vi 432 2e-119 gb|AAF21530.1| envelope glycoprotein [Simian immunodeficiency vi 427 4e-118 gb|AAA47593.1| glycoprotein 120 421 6e-116 gb|AAF21537.1| envelope glycoprotein [Simian immunodeficiency vi 393 1e-107 gb|AAF21545.1| envelope glycoprotein [Simian immunodeficiency vi 374 8e-102 dbj|BAA82439.1| envelope glycoprotein [Simian immunodeficiency v 370 8e-101 dbj|BAA82408.1| env of SIVagm [Simian immunodeficiency virus - a 358 2e-97 gb|AAT41729.1| Env [Simian immunodeficiency virus] 333 1e-89 gb|AAP46095.1| envelope glycoprotein [Simian immunodeficiency vi 331 5e-89 gb|AAC68662.1| Env [Simian immunodeficiency virus] 330 7e-89 gb|AAK64201.1| env protein [Simian immunodeficiency virus 17E-Cl 329 2e-88 gb|AAO67286.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAP46096.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAA91937.1| env protein 328 3e-88 gb|AAV69864.1| envelope glycoprotein [SIV vector pCLN8] 328 3e-88 gb|AAZ52606.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAX85828.2| envelope glycoprotein [Simian immunodeficiency vi 328 4e-88 gb|AAK64192.1| truncated envelope glycoprotein [Simian immuno... 328 5e-88 gb|AAA47765.1| envelope polyprotein 328 5e-88 gb|AAA47773.1| envelope polyprotein 328 5e-88 gb|AAX85833.2| envelope glycoprotein [Simian immunodeficiency vi 327 6e-88 gb|AAZ52607.1| envelope glycoprotein [Simian immunodeficiency vi 327 6e-88 gb|AAO67291.1| envelope glycoprotein [Simian immunodeficiency vi 327 7e-88 ALIGNMENTS >gb|AAA99542.1| envelope protein Length=379 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 344/379 (90%), Positives = 346/379 (91%), Gaps = 0/379 (0%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT Sbjct 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHRTSNDS LILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC Sbjct 61 QIWQKHRTSNDSVLILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NWKGAWKEVKEEIV LPKERYRGTND KRIF QRQWGDPETANLWFNCHGEFFYCK Sbjct 121 HFQGNWKGAWKEVKEEIVKLPKERYRGTNDTKRIFLQRQWGDPETANLWFNCHGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVINDWYTISKK 240 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TY+PPREGHLECTSTVTGMTVELNYI +NRTNVTLSPQIESIWAAELDRYKLVEITPIGF Sbjct 241 TYSPPREGHLECTSTVTGMTVELNYINQNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 301 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 360 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 361 LAAVEAQQQMLKLTIWGVK 379 >gb|AAA99544.1| envelope protein Length=375 Score = 635 bits (1638), Expect = 1e-180, Method: Composition-based stats. Identities = 312/379 (82%), Positives = 327/379 (86%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCND DYDGFK NCSNVSVVHCT LMNTTVTTGLLLNGSYSENRT Sbjct 1 ELRLRYCAPAGFALLKCNDYDYDGFKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYSENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR SNDS LI +NKHYNLT+TCKRPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWQKHRVSNDSVLIQINKHYNLTITCKRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW GAWKE+K+EIV LPK+RYRGTND ++I+ RQWGDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWHGAWKEIKQEIVKLPKDRYRGTNDTEQIYLTRQWGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T +ADHN+C N+ TK+G RAPGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNKTWNADHNQCDNS--TKTG--RAPGPCVQRTYVACHIRSVINDWYTISKK 236 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNYI NRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 237 TYAPPREGHLQCTSTVTGMTVELNYINDNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 296 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKR+PFV VQSQHLLAGILQQQKNL Sbjct 297 APTEVRRYTGGHERQKRIPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 356 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 357 LAAVEAQQQMLKLTIWGVK 375 >sp|P27977|ENV_SIVVG Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA91919.1| env polyprotein [Simian immunodeficiency virus] Length=877 Score = 619 bits (1595), Expect = 2e-175, Method: Composition-based stats. Identities = 306/379 (80%), Positives = 323/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCND DY GFKTNCSNVSVVHCTNL+NTTVTTGLLLNGSYSENRT Sbjct 231 ELRLRYCAPAGFALLKCNDYDYAGFKTNCSNVSVVHCTNLINTTVTTGLLLNGSYSENRT 290 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR SNDS L+L NKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQ+YN RLRQAWC Sbjct 291 QIWQKHRVSNDSVLVLFNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQRYNTRLRQAWC 350 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAWKEVK EIV LPK+RY+GTND + I+ QR +GDPE ANLWFNC GEFFYCK Sbjct 351 HFQGNWRGAWKEVKNEIVKLPKDRYQGTNDTEEIYLQRLFGDPEAANLWFNCQGEFFYCK 410 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN TVD DHN C +GTK G +APGPC QRTYVACHIRSVI T+S+K Sbjct 411 MDWFLNYLNNRTVDPDHNPC---NGTK-GKGKAPGPCAQRTYVACHIRSVINDWYTLSRK 466 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGM+VELNY KNRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 467 TYAPPREGHLQCTSTVTGMSVELNYNSKNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 526 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGH+R KRVPFV VQSQHLLAGILQQQKNL Sbjct 527 APTEVRRYTGGHDRTKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 586 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 587 LAAVEAQQQMLKLTIWGVK 605 >pir||S46345 env polyprotein - simian immunodeficiency virus SIVagm (isolate VER-2) (fragment) gb|AAA21503.1| envelope protein Length=375 Score = 617 bits (1590), Expect = 5e-175, Method: Composition-based stats. Identities = 299/379 (78%), Positives = 324/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDHDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIW+KH SNDS +IL+NK +NLTVTC+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWRKHGVSNDSVIILINKAFNLTVTCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+E+++EI LP +YRGTND ++IF QRQ+GDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWRGAWEEIRQEITKLPPHKYRGTNDTEKIFLQRQFGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHN C +G+++ + RAPGPC QRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLTVDADHNSC---NGSRT-SPRAPGPCAQRTYVACHIRSVINDWYTISKK 236 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY +NRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 237 TYAPPREGHLQCTSTVTGMTVELNYNSRNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 296 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 297 APTDVRRYTGGHERQKRVPFVQGFLGFLGAAGTAMGATATALTVQSQHLLAGILQQQKNL 356 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 357 LAAVEAQQQMLKLTIWGVK 375 >dbj|BAF32565.1| env polyprotein [Simian immunodeficiency virus] Length=863 Score = 610 bits (1574), Expect = 3e-173, Method: Composition-based stats. Identities = 299/379 (78%), Positives = 323/379 (85%), Gaps = 5/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 +LRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 224 QLRLRYCAPAGYALLKCNDEDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 283 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +N++ LIL NKHYNL+VTC+RPGNKTVLPVTIMAGLVFHSQKYN++LRQAWC Sbjct 284 QIWQKHRVNNNTVLILFNKHYNLSVTCRRPGNKTVLPVTIMAGLVFHSQKYNMKLRQAWC 343 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+EVK++IV LPK+RY+GTN+ + I+ QRQWGDPE +NLWFNC GEFFYCK Sbjct 344 HFEGNWRGAWREVKQKIVELPKDRYKGTNNTEHIYLQRQWGDPEASNLWFNCQGEFFYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T DADHN C S K G+ APGPCVQRTYVACHIRSVI T+SKK Sbjct 404 MDWFLNYLNNKTWDADHNFC---SSKKKGH--APGPCVQRTYVACHIRSVINDWYTLSKK 458 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+C STVTGMTVELNY KNRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 459 TYAPPREGHLQCRSTVTGMTVELNYNSKNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 518 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 519 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 578 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 579 LAAVEAQQQMLKLTIWGVK 597 >sp|P27757|ENV_SIVV1 Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA91911.1| env polyprotein Length=768 Score = 609 bits (1571), Expect = 8e-173, Method: Composition-based stats. Identities = 313/379 (82%), Positives = 323/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY GFK CSNVSVVHCT LMNTTVTTGLLLNGSYSENRT Sbjct 226 ELRLRYCAPAGYALLKCNDWDYAGFKPECSNVSVVHCTTLMNTTVTTGLLLNGSYSENRT 285 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKH SNDS LILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 286 QIWQKHGVSNDSVLILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 345 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NWKGAWKEV+EEIV LPKERY+GTND +IF QRQ+GDPE ANLWFNC GEFFYCK Sbjct 346 HFQGNWKGAWKEVQEEIVKLPKERYQGTNDTNKIFLQRQFGDPEAANLWFNCQGEFFYCK 405 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHN CKN +G R+PGPCVQRTYVACHIRSVI TISKK Sbjct 406 MDWFLNYLNNLTVDADHNHCKNN----AGKGRSPGPCVQRTYVACHIRSVINDWYTISKK 461 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY +NRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 462 TYAPPREGHLQCTSTVTGMTVELNYNNQNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 521 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGG ERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 522 APTEVRRYTGGQERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 581 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAV AQQQMLKLTIWGVK Sbjct 582 LAAVGAQQQMLKLTIWGVK 600 >gb|AAC99812.1| V2-gp41 junction [Simian immunodeficiency virus] Length=371 Score = 608 bits (1567), Expect = 2e-172, Method: Composition-based stats. Identities = 298/379 (78%), Positives = 316/379 (83%), Gaps = 8/379 (2%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTV+TGLLLNGSY+ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDYDYNGYKQNCSNVSVVHCTGLMNTTVSTGLLLNGSYAENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWQKHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAWKEV+++IV LPK+RYRGTN ++IF QRQWGDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWRGAWKEVRQKIVELPKDRYRGTNQTEQIFLQRQWGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNL+VDADHN C S R PGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLSVDADHNPCPKKS-------RQPGPCVQRTYVACHIRSVIDDWYTISKK 233 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAAEL RYKLVEITPIGF Sbjct 234 TYAPPREGHLQCTSTVTGMTVELNYNSDNRTNVTLSPQIEGIWAAELGRYKLVEITPIGF 293 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRY G RQKRVPFV VQSQHLLAGILQQQKNL Sbjct 294 APTDVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 352 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQMLKLTIWGVK Sbjct 353 LAAVEQQQQMLKLTIWGVK 371 >gb|AAA64263.1| envelope Length=877 Score = 605 bits (1560), Expect = 2e-171, Method: Composition-based stats. Identities = 298/379 (78%), Positives = 319/379 (84%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKC+D DY+G+K NCSNVSVVHCT LMNTTV+TGLLLNGSYSENRT Sbjct 231 ELRLRYCAPAGFALLKCHDHDYNGYKQNCSNVSVVHCTGLMNTTVSTGLLLNGSYSENRT 290 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +NDS ++L NK+YNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 291 QIWQKHRVNNDSVIVLFNKYYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWC 350 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF W+ AWKEVKEEI+ LPK+RYRGTND ++I+ QRQ+GDPE ANLWFNC GEFFYCK Sbjct 351 HFQGRWREAWKEVKEEIIKLPKDRYRGTNDTEKIYLQRQFGDPEAANLWFNCQGEFFYCK 410 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN +VDA+HN+C N TK GN APGPCVQRTYVACHIRSVI TISKK Sbjct 411 MDWFLNYLNNQSVDANHNQCSNE--TKKGN--APGPCVQRTYVACHIRSVINDWYTISKK 466 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLECTSTVTGMTVELNY RTNVTLSPQIE IWAAEL RYKLVEITPIGF Sbjct 467 VYAPPREGHLECTSTVTGMTVELNYNNNYRTNVTLSPQIEGIWAAELGRYKLVEITPIGF 526 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT VRRYTGG +R KRVPFV VQSQHLLAGI+QQQKNL Sbjct 527 APTNVRRYTGGQDRSKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGIMQQQKNL 586 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 587 LAAVEAQQQMLKLTIWGVK 605 >sp|P05886|ENV_SIVVT Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] emb|CAA30663.2| env polyprotein [Simian immunodeficiency virus] Length=865 Score = 602 bits (1551), Expect = 2e-170, Method: Composition-based stats. Identities = 296/379 (78%), Positives = 321/379 (84%), Gaps = 5/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 +LRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 225 QLRLRYCAPAGYALLKCNDEDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 284 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +N++ LIL NKHYNL+VTC+RPGNKTVLPVTIMAGLVFHSQKYN++LRQAWC Sbjct 285 QIWQKHRVNNNTVLILFNKHYNLSVTCRRPGNKTVLPVTIMAGLVFHSQKYNMKLRQAWC 344 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+EVK++IV LPK+RY+GTN+ + I+ QRQWGDPE +NLWFNC GEFFYCK Sbjct 345 HFEGNWRGAWREVKQKIVELPKDRYKGTNNTEHIYLQRQWGDPEASNLWFNCQGEFFYCK 404 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T DA HN C S K G+ APGPCVQRTYVA HIRSVI T+SKK Sbjct 405 MDWFLNYLNNKTWDAYHNFC---SSKKKGH--APGPCVQRTYVAYHIRSVINDSYTLSKK 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+C STVTGMTVELNY KNRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 460 TYAPPREGHLQCRSTVTGMTVELNYNSKNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 519 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQS+HLLAGILQQQKNL Sbjct 520 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAASSLTVQSRHLLAGILQQQKNL 579 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 580 LAAVEAQQQMLKLTIWGVK 598 >pir||S46344 env polyprotein - simian immunodeficiency virus SIVagm (isolate VER-1) (fragment) gb|AAA21502.1| envelope protein Length=372 Score = 588 bits (1516), Expect = 2e-166, Method: Composition-based stats. Identities = 284/379 (74%), Positives = 314/379 (82%), Gaps = 7/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND +Y GF C NVSVVHCT LMNTTV+TGLLLNGSY+ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDRNYTGFAPRCRNVSVVHCTGLMNTTVSTGLLLNGSYTENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 +IWQKH+ SN+S +I +NKHYNLT+ C RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 61 EIWQKHKVSNNSVIIRINKHYNLTIRCVRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF +W+GAW+E+K++IV LPKERY+GTND K+IF QRQWGDPE +NLWFNCHGEFFYCK Sbjct 121 HFKGDWRGAWREIKQKIVELPKERYQGTNDTKQIFLQRQWGDPEASNLWFNCHGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDW LNY+NNLTVDA+HN C +T G + PGPCVQRTYV CHIRSVI +++K Sbjct 181 MDWMLNYINNLTVDANHNNCNSTQGKR------PGPCVQRTYVGCHIRSVINDWYKLARK 234 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHLECTSTVTGM VELNYI KNRTNVTLSPQIE+IWA+EL RYKLVEITPIGF Sbjct 235 TYAPPREGHLECTSTVTGMAVELNYIHKNRTNVTLSPQIEAIWASELGRYKLVEITPIGF 294 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT VRRYTG R+KRVPFV VQSQHLLAGILQQQKNL Sbjct 295 APTPVRRYTGP-SREKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 353 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 354 LAAVEAQQQMLKLTIWGVK 372 >pir||S46352 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-1) gb|AAA21510.1| envelope glycoprotein [Simian immunodeficiency virus - agm.sab-1] Length=732 Score = 509 bits (1311), Expect = 1e-142, Method: Composition-based stats. Identities = 257/378 (67%), Positives = 284/378 (75%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTTV+TG+ +NGSY NRT+ Sbjct 223 FRLRYCAPAGYALLRCADTDYSGHKA-CRNVTVSACTRLINTTVSTGIGINGSYVANRTE 281 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ SNDS +I LN+++NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWC Sbjct 282 IWQKNGNSNDSVIIRLNRYFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCW 341 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F NW+GAWKEVKE IV LP ++Y GTND +IF QRQWGDPE+ +FNC GEFFYCKM Sbjct 342 FGGNWRGAWKEVKETIVRLPPKKYSGTNDTNKIFLQRQWGDPESEFFFFNCQGEFFYCKM 401 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C K PC QRTYV CHIR V+ T+SKKT Sbjct 402 DWFLNYLNNKSVDPDHNNCA---------KNNTKPCWQRTYVPCHIRQVVNDWYTLSKKT 452 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQIESIWA EL YKLVEI PIGFA Sbjct 453 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIESIWANELGDYKLVEIKPIGFA 512 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PT+VRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 513 PTKVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 571 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 572 AAVEQQQQMLKLTIWGVK 589 >pir||S46338 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-3) (fragment) gb|AAA21496.1| envelope protein Length=368 Score = 508 bits (1309), Expect = 2e-142, Method: Composition-based stats. Identities = 257/378 (67%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTTV+TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCADTDYSGHK-KCKNVTVSACTRLINTTVSTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ SNDS +I LN+H+NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWC Sbjct 61 IWQKNGNSNDSVIIRLNRHFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F NW+GAW+EVKE IV LP +RY+GT D +IF QRQWGDPE +FNC GEFFYCKM Sbjct 121 FGGNWRGAWQEVKETIVALPPDRYQGTKDTNKIFLQRQWGDPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C TS K C QR Y CHIR V+ T+SKKT Sbjct 181 DWFLNYLNNQSVDPDHNPCNKTSDKK---------CWQRNYAPCHIRQVVNDWYTLSKKT 231 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQIESIWA EL YKLVEI PIGFA Sbjct 232 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIESIWANELGDYKLVEIKPIGFA 291 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 292 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 350 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 351 AAVEQQQQMLKLTIWGVK 368 >pir||S46341 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN17) (fragment) gb|AAA21499.1| envelope protein Length=371 Score = 503 bits (1295), Expect = 8e-141, Method: Composition-based stats. Identities = 251/383 (65%), Positives = 285/383 (74%), Gaps = 18/383 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGFGI-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 +WQKH SNDS +I LNK YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWCH Sbjct 61 VWQKHGVSNDSVIIKLNKFYNLTIKCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F WK AWKEV+E IV LPKE+YRGTND K+I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FQGKWKEAWKEVRETIVKLPKEKYRGTNDTKKIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTV-----DADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLET 236 DWF+NYLNN + D + N+CK+ P C +R+YV CHIRSV+ T Sbjct 181 DWFVNYLNNDSARRRKEDVEGNDCKD-----------PRKCFKRSYVPCHIRSVVNDWYT 229 Query 237 ISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEIT 296 +SKKTYAPPREGHLECTSTVT M V L+Y+ KN TNVTL+ +E+IWA EL RYK++EI Sbjct 230 LSKKTYAPPREGHLECTSTVTSMMVSLDYVNKNMTNVTLTANLENIWAYELGRYKIIEIK 289 Query 297 PIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQ 356 PIGFAPT+VRRY G R+KRVPFV VQSQ LLAGILQQ Sbjct 290 PIGFAPTDVRRYVGP-TREKRVPFVLGSLGFLGRAGAAMGATATELTVQSQQLLAGILQQ 348 Query 357 QKNLLAAVEAQQQMLKLTIWGVK 379 QKNLLAAVE QQQMLKLTIWGVK Sbjct 349 QKNLLAAVEQQQQMLKLTIWGVK 371 >gb|AAC33802.1| envelope glycoprotein [Simian immunodeficiency virus] Length=871 Score = 501 bits (1291), Expect = 2e-140, Method: Composition-based stats. Identities = 254/378 (67%), Positives = 284/378 (75%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K +CSNVSV CT L+NTT++TG+ +NGSY NRT+ Sbjct 226 FRLRYCAPAGYALLRCRDTDYSGHK-DCSNVSVSACTRLINTTISTGIGINGSYVANRTE 284 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SND+ +I LN+HYNLT+ C+RPGNKTVLPVTIMAGLVFHSQK N +L+QAWC Sbjct 285 IWQENGNSNDTVIIRLNRHYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKDNTKLKQAWCW 344 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+ AW+EVKE IV LPK+R GTND RIF +RQWGDPE +FNC GEFFYCKM Sbjct 345 FGGRWRSAWREVKETIVELPKDRDSGTNDTSRIFLRRQWGDPEAEFFFFNCQGEFFYCKM 404 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLN+LNN +VD DHN C TK +K+ C QRTYV CHIR V+ T+SKKT Sbjct 405 DWFLNFLNNQSVDPDHNNC-----TKQNDKK----CWQRTYVPCHIRQVVNDWYTLSKKT 455 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 456 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 515 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 516 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 574 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 575 AAVEQQQQMLKLTIWGVK 592 >pir||S46343 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN49) (fragment) gb|AAA21501.1| envelope protein Length=379 Score = 500 bits (1287), Expect = 7e-140, Method: Composition-based stats. Identities = 250/384 (65%), Positives = 290/384 (75%), Gaps = 12/384 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y G+ C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGYGI-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKHR +NDS +I LNK+Y L VTC+RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWCH Sbjct 61 IWQKHRINNDSVIIKLNKYYKLGVTCRRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LP++RY GTN+ +I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FHGDWKGAWKEVRETIVKLPRDRYSGTNNTNQIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLT-----VDADHNECKN-TSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLE 235 DWF+N+LNN + D + N C N T G +G+++ C++RTYV CHIRSV+ Sbjct 181 DWFVNWLNNESAGGNYTDVEGNPCSNSTKGGMTGSRK----CLKRTYVGCHIRSVVNDWY 236 Query 236 TISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEI 295 ++SKKTYAPPREGHLECTSTVT M V L+Y KN TNVTL+ +E+IWA EL RYKL+EI Sbjct 237 SLSKKTYAPPREGHLECTSTVTSMMVSLDYNSKNMTNVTLTANLENIWAYELGRYKLIEI 296 Query 296 TPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQ 355 PIGFAPTEVRRY G R+KRVPFV VQSQ LLAGILQ Sbjct 297 KPIGFAPTEVRRYVGP-TREKRVPFVLGFLGFLGRAGAAMGATETELTVQSQQLLAGILQ 355 Query 356 QQKNLLAAVEAQQQMLKLTIWGVK 379 QQKNLLAAVE QQQMLKLTIWGVK Sbjct 356 QQKNLLAAVEQQQQMLKLTIWGVK 379 >gb|AAC33803.1| envelope glycoprotein [Simian immunodeficiency virus] Length=871 Score = 499 bits (1286), Expect = 1e-139, Method: Composition-based stats. Identities = 251/378 (66%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K +CSNVSV CT L+NTT++TG+ +NGSY NRT+ Sbjct 226 FRLRYCAPAGYALLRCRDTDYSGHK-DCSNVSVSACTRLINTTISTGIGINGSYVANRTE 284 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SND+ +I LN+HYNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +L+QAWC Sbjct 285 IWQENGNSNDTVIIRLNRHYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLKQAWCW 344 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W+ AW+ V+E IV LPK+RY GTND +IF RQWGDPET +FNC GEFFYCKM Sbjct 345 FGGHWRSAWQGVEETIVELPKDRYSGTNDTSKIFLHRQWGDPETEFFFFNCQGEFFYCKM 404 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLN LNN +VD DHN C + K C QRTYV CHIR V+ T+SKKT Sbjct 405 DWFLNGLNNQSVDPDHNNCTKQNDNK---------CWQRTYVPCHIRQVVNDWYTLSKKT 455 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 456 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 515 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQ+RVPFV VQSQ LLAGILQQQKNLL Sbjct 516 PTEVRRYTGP-ERQERVPFVLGFLGFLGAAGATMGAAATTLTVQSQQLLAGILQQQKNLL 574 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 575 AAVEQQQQMLKLTIWGVK 592 >pir||S46337 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-2) (fragment) gb|AAA21495.1| envelope protein Length=369 Score = 498 bits (1281), Expect = 3e-139, Method: Composition-based stats. Identities = 251/378 (66%), Positives = 282/378 (74%), Gaps = 10/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTT++TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCADTDYSGHKA-CKNVTVSACTRLINTTISTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ +N + +I LN+H+NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 61 IWQKNGNANHTVIIRLNRHFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W+GAW+EVKE+IV LP +RY GTND +IF QRQWGDPE +FNC GEFFYCKM Sbjct 121 FGGDWRGAWQEVKEKIVALPPDRYSGTNDTNKIFLQRQWGDPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C GN + C QRTYV CHIR ++ T+SKKT Sbjct 181 DWFLNYLNNQSVDPDHNPC-------GGNDKNNRKCWQRTYVPCHIRQIVNDWYTLSKKT 233 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VEL Y KNRTNVTLSP IESIWA EL YKLVEI PIGFA Sbjct 234 YAPPREGHLECNSTATALYVELLYNSKNRTNVTLSPHIESIWANELGDYKLVEIKPIGFA 293 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 294 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 352 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 353 AAVE-QQQMLKLTIWGVK 369 >pir||S46339 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-4) (fragment) gb|AAA21497.1| envelope protein Length=368 Score = 493 bits (1269), Expect = 8e-138, Method: Composition-based stats. Identities = 254/378 (67%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D+DY G K NC NVSV CT L+NTTV+TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCRDSDYRGHK-NCQNVSVSACTRLINTTVSTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SN++A+I LN++YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 IWQENGNSNNTAIIRLNRYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+GAW+E KEEIV L ERY GT + +IF QRQWG PE +FNC GEFFYCKM Sbjct 121 FGGKWRGAWQEAKEEIVKLSPERYSGTKNTSQIFLQRQWGGPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD +HN C T +KR C QRTYV CHIR V+ T+SKKT Sbjct 181 DWFLNYLNNQSVDPNHNTC-----TPKSDKR----CWQRTYVPCHIRQVVNDWYTLSKKT 231 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 232 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 291 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PT VRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 292 PTNVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 350 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 351 AAVEQQQQMLKLTIWGVK 368 >gb|AAC59620.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 492 bits (1266), Expect = 2e-137, Method: Composition-based stats. Identities = 239/285 (83%), Positives = 250/285 (87%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS LIL N+HYNLTVTCKRPGNKT Sbjct 1 VHCTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNRHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQ YNLRLRQAWCHF NWKGAWKEV++E+V LPK+RYRGT RI Sbjct 61 VLPVTIMAGLVFHSQSYNLRLRQAWCHFEGNWKGAWKEVRQELVKLPKDRYRGTKHTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 + QRQ+GDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH T+ + AP Sbjct 121 YLQRQFGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHYYQLPTN-----RQDAP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYKDNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIESIWAAEL RYKLVEITPIGFAPTEVRRYTGGHER KRVP Sbjct 236 LSPQIESIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERTKRVP 280 >gb|AAC99811.1| V2-V5 region [Simian immunodeficiency virus] gb|AAF21586.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21587.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21589.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21591.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 490 bits (1262), Expect = 6e-137, Method: Composition-based stats. Identities = 238/304 (78%), Positives = 255/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59617.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 489 bits (1260), Expect = 1e-136, Method: Composition-based stats. Identities = 238/285 (83%), Positives = 252/285 (88%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSYSENRTQIWQKHR +NDS LIL NK YNLTV C+RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNKWYNLTVRCRRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYN RLRQAWCHF NW+GAWKEV+EE+V LPK+RYRGTN ++I Sbjct 61 VLPVTIMAGLVFHSQKYNTRLRQAWCHFQGNWRGAWKEVREELVKLPKDRYRGTNKTEQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQ+GDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHN+C N ++G RAP Sbjct 121 FLQRQFGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNKCNN---NRTG--RAP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLE STVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLELLSTVTGMTVELNYNSNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE IWAAEL RYKLVEITPIGFAPTE+RRYTGGHERQK VP Sbjct 236 LSPQIEGIWAAELGRYKLVEITPIGFAPTEIRRYTGGHERQKTVP 280 >ref|NP_054372.1| envelope protein [Simian immunodeficiency virus] sp|Q02837|ENV_SIVG1 Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA47591.1| envelope protein [Simian immunodeficiency virus] gb|AAA91928.1| envelope glycoprotein [Simian immunodeficiency virus] Length=854 Score = 486 bits (1252), Expect = 7e-136, Method: Composition-based stats. Identities = 249/379 (65%), Positives = 281/379 (74%), Gaps = 10/379 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LR+RYCAPAG+ALLKCND DY GF C NVSVVHCT L+NTT+TTG+ LNGS SENRT+ Sbjct 215 LRVRYCAPAGYALLKCNDKDYRGFAPKCKNVSVVHCTRLINTTITTGIGLNGSRSENRTE 274 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK ND+ +I LNK YNLTV C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWCH Sbjct 275 IWQKGGNDNDTVIIKLNKFYNLTVRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCH 334 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+EE+ K + + I +R WGDPE+AN WFNC GEFFYCKM Sbjct 335 FQGDWKGAWKEVREEV---KKVKNLTEVSIENIHLRRIWGDPESANFWFNCQGEFFYCKM 391 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NYLNN T DA+ T+ T K PGPCVQRTYVACHIR V+ T+SKK Sbjct 392 DWFINYLNNRTEDAE-----GTNRTCDKGKPGPGPCVQRTYVACHIRQVVNDWYTVSKKV 446 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLEC S+VT + V ++Y K+ NVTLSPQ+ SIWA EL YKLVEITPIGF Sbjct 447 YAPPREGHLECNSSVTALYVAIDYNNKSGPINVTLSPQVRSIWAYELGDYKLVEITPIGF 506 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG R+KRVPFV VQS+HLLAGILQQQKNL Sbjct 507 APTDVRRYTGP-TREKRVPFVLGFLGFLGAAGTAMGAAATTLTVQSRHLLAGILQQQKNL 565 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQ+LKLTIWGVK Sbjct 566 LAAVEQQQQLLKLTIWGVK 584 >pir||S46335 env polyprotein - simian immunodeficiency virus SIVagm (isolate GRI-3) (fragment) gb|AAA21493.1| envelope protein Length=371 Score = 486 bits (1250), Expect = 1e-135, Method: Composition-based stats. Identities = 245/379 (64%), Positives = 280/379 (73%), Gaps = 10/379 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LR+RYCAPAG+ALLKCND DY+GF C NVSVVHCT L+NTT+TTG+ LNGS ENRT+ Sbjct 2 LRVRYCAPAGYALLKCNDKDYNGFAPKCKNVSVVHCTRLINTTITTGIGLNGSRVENRTE 61 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SND+ +I LNK YNLTV C+RPGNKT+LPVTIMAG VFHSQKYN +L+QAWCH Sbjct 62 IWQEKGNSNDTVIIKLNKFYNLTVRCRRPGNKTILPVTIMAGRVFHSQKYNTKLKQAWCH 121 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 NW GAWKEV+E+I +E+ + I +RQWGDPE AN WFNCHGEFFYCKM Sbjct 122 SQGNWLGAWKEVREKI---KEEKNLTEVKIENIHLRRQWGDPEAANFWFNCHGEFFYCKM 178 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NYLNN TVDAD C T + PGPC ++TYVACHIR V+ T++KKT Sbjct 179 DWFINYLNNQTVDADGKSC-----TSHKKGQGPGPCAKKTYVACHIRQVVNDWYTLTKKT 233 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLEC STVT + VE+NY K+ NVTLS Q+ SIWA EL YKLVEITPIGF Sbjct 234 YAPPREGHLECNSTVTALYVEINYNNKSGPINVTLSSQVRSIWAYELGDYKLVEITPIGF 293 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG R+KRVPFV VQS+HLLAGILQQQKNL Sbjct 294 APTDVRRYTGP-SREKRVPFVLGFLGFLGAAGTAMGAAATALTVQSRHLLAGILQQQKNL 352 Query 361 LAAVEAQQQMLKLTIWGVK 379 L AVE QQQ+LKLTIWGVK Sbjct 353 LVAVEQQQQLLKLTIWGVK 371 >gb|AAC59616.1| envelope glycoprotein [Simian immunodeficiency virus] Length=283 Score = 485 bits (1249), Expect = 2e-135, Method: Composition-based stats. Identities = 234/285 (82%), Positives = 248/285 (87%), Gaps = 2/285 (0%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSY+ENRTQIWQKHR +NDS ++L NK+YNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYAENRTQIWQKHRVNNDSVIVLFNKYYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAG VFHSQKYN RLRQAWCHF NWKGAWKEV+E+IV LPK+RYRGTN RI Sbjct 61 VLPVTIMAGRVFHSQKYNTRLRQAWCHFRGNWKGAWKEVREKIVQLPKDRYRGTNRTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQWGDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVD C N + KS RAP Sbjct 121 FLQRQWGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDRRDKPCNNNNTNKS--SRAP 178 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY +RTNVT Sbjct 179 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNNNDRTNVT 238 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQ+ESIWAAEL RYKLVEITPIGFAPT++RRYTGGHERQKRVP Sbjct 239 LSPQVESIWAAELGRYKLVEITPIGFAPTDIRRYTGGHERQKRVP 283 >gb|AAF21588.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 485 bits (1248), Expect = 2e-135, Method: Composition-based stats. Identities = 236/304 (77%), Positives = 254/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ +NDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKVNNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 HSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 SHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59621.1| envelope glycoprotein [Simian immunodeficiency virus] Length=283 Score = 484 bits (1247), Expect = 3e-135, Method: Composition-based stats. Identities = 234/285 (82%), Positives = 252/285 (88%), Gaps = 2/285 (0%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCTNLMNTTVTTGLLLNGSYSENRT+IWQKH SNDS LILLNKHYNLTVTCKRPGNKT Sbjct 1 VHCTNLMNTTVTTGLLLNGSYSENRTEIWQKHGVSNDSVLILLNKHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 V+PVTIMAGLVFHSQKYNLRLRQA CHF NWKGAWKEVK++IV LPKE+YRGT++ ++I Sbjct 61 VVPVTIMAGLVFHSQKYNLRLRQASCHFQGNWKGAWKEVKQKIVELPKEKYRGTSNTEQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QR +GDPE ANLWFNC GEFFYCKMDWFLNYLNN+ +D D+NEC TK GN AP Sbjct 121 FLQRHFGDPEAANLWFNCQGEFFYCKMDWFLNYLNNVHLDPDYNECHLNDTTKKGN--AP 178 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSV+ T+SK+ APPREGHL+CTSTVTGM VELNY NRTNVT Sbjct 179 GPCVQRTYVACHIRSVVNDWYTVSKRNNAPPREGHLQCTSTVTGMAVELNYNSDNRTNVT 238 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE+IWAAEL RYKLVEITPIGFAPTEVRRYTGGHERQKRVP Sbjct 239 LSPQIENIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 283 >pir||S46340 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN-1) (fragment) gb|AAA21498.1| envelope protein Length=373 Score = 484 bits (1247), Expect = 3e-135, Method: Composition-based stats. Identities = 240/378 (63%), Positives = 283/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ +NGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGFGV-CRNVSVVSCTGLMNTTVSSAFGINGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SN+S +I LNKHY L + C+RPGNKTVLPVTIMAGLVFHSQ+YN +LRQAWCH Sbjct 61 IWQKHGVSNNSVIIKLNKHYKLKIVCRRPGNKTVLPVTIMAGLVFHSQQYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAW+EV++ IV LPKE+YRGTN+ ++I+ RQWGDPE AN+W NC GEFFYC Sbjct 121 FQGDWKGAWREVRKTIVELPKEKYRGTNNTRQIWLSRQWGDPEAANIWLNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+N+LNN + + + + + T +KR C +RTYV CHIRS++ T+SKKT Sbjct 181 DWFVNWLNNESNSGRNVDVEGNNCTTGKDKR----CYKRTYVPCHIRSIVNDWYTLSKKT 236 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT M V L+Y K RTNVTL+ +E+IWA EL RYKL+EI PIGFA Sbjct 237 YAPPREGHLECTSTVTSMMVSLDYNSKERTNVTLTANLENIWAYELGRYKLIEIEPIGFA 296 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTE+RRY G R+KRVPFV VQSQ LLAG+LQQQKNLL Sbjct 297 PTEIRRYVGP-TREKRVPFVLGFLGFLGAAGAAMGATATALTVQSQQLLAGMLQQQKNLL 355 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 356 AAVEQQQQMLKLTIWGVK 373 >pir||S46336 env polyprotein - simian immunodeficiency virus SIVagm (isolate GRI-2) (fragment) gb|AAA21494.1| envelope protein Length=367 Score = 484 bits (1246), Expect = 4e-135, Method: Composition-based stats. Identities = 245/379 (64%), Positives = 284/379 (74%), Gaps = 14/379 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFALL+C D +Y+GF +C NV+V HCT L+NTTV+TG+ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFALLRCLDKNYNGFAPSCKNVTVTHCTRLINTTVSTGIGLNGSRAENRTE 61 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SN++ +I LNK YNLTV C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWCH Sbjct 62 IWQEKGNSNNTVIIKLNKFYNLTVRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCH 121 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W GAWKEVK+E+ K + T+D K +RQWGDPE AN WF+C GEFFYCKM Sbjct 122 FQGDWHGAWKEVKQEV---KKAKNLTTDDIK---LRRQWGDPEAANFWFSCQGEFFYCKM 175 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NY+NN TVDAD N+C G PGPCVQRTYVACHIR V+ T++KKT Sbjct 176 DWFINYINNETVDADGNKCNKPKGP------GPGPCVQRTYVACHIRQVVNDWYTLTKKT 229 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG LEC S+VT + VE+NY ++ NVTLSPQI SIWA EL YKLVEITPIGF Sbjct 230 YRPPREGQLECNSSVTALYVEINYNNESGPINVTLSPQIRSIWAYELGDYKLVEITPIGF 289 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG +QKRVPFV VQS+HLLAGILQQQ+NL Sbjct 290 APTDVRRYTGP-TKQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSRHLLAGILQQQRNL 348 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQ+LKLTIWGVK Sbjct 349 LAAVEQQQQLLKLTIWGVK 367 >gb|AAC57057.1| envelope glycoprotein [Simian immunodeficiency virus - agm.tan-1] Length=879 Score = 484 bits (1245), Expect = 5e-135, Method: Composition-based stats. Identities = 241/378 (63%), Positives = 283/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ +NGS +ENRT+ Sbjct 224 LRLRYCAPAGFAILKCKDTNYTGFGV-CRNVSVVSCTGLMNTTVSSAFGINGSQAENRTE 282 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SN+S +I LNKHY L + C+RPGNKTVLPVTIMAGLVFHSQ+YN +LRQAWCH Sbjct 283 IWQKHGVSNNSVIIKLNKHYKLKIVCRRPGNKTVLPVTIMAGLVFHSQQYNTKLRQAWCH 342 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAW+EV++ IV LPKE+YRGTN+ ++I+ RQWGDPE AN+W NC GEFFYC Sbjct 343 FQGDWKGAWREVRKTIVELPKEKYRGTNNTRQIWLSRQWGDPEAANIWLNCQGEFFYCTP 402 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+N+LNN + + + + + T +KR C +RTYV CHIRS++ T+SKKT Sbjct 403 DWFVNWLNNESNSGRNVDVEGNNCTTGKDKR----CYKRTYVPCHIRSIVNDWYTLSKKT 458 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT M V L+Y K RTNVTL+ +E+IWA EL RYKL+EI PIGFA Sbjct 459 YAPPREGHLECTSTVTSMMVSLDYNSKERTNVTLTANLENIWAYELGRYKLIEIEPIGFA 518 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTE+RRY G R+KRVPFV VQSQ LLAGILQQQKNLL Sbjct 519 PTEIRRYVGP-TREKRVPFVLGFLGFLGAAGAAMGATATALTVQSQQLLAGILQQQKNLL 577 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 578 AAVEQQQQMLKLTIWGVK 595 >gb|AAF21595.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 483 bits (1244), Expect = 7e-135, Method: Composition-based stats. Identities = 235/304 (77%), Positives = 253/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I +KHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFSKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN + RQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKSRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59618.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 481 bits (1239), Expect = 3e-134, Method: Composition-based stats. Identities = 236/285 (82%), Positives = 250/285 (87%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSYSENRTQIWQKHR +NDS +IL NKHYNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYSENRTQIWQKHRVNNDSVIILFNKHYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYN++LRQAWCHF NW+GAWKEV+E+IV LPKERYRGTN+ K+I Sbjct 61 VLPVTIMAGLVFHSQKYNMKLRQAWCHFRGNWRGAWKEVREKIVKLPKERYRGTNNTKQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQ+GDPE ANLWFN HGEFFYCKMDWFLNYLNNLTVD N ++ K GN AP Sbjct 121 FLQRQFGDPEAANLWFNRHGEFFYCKMDWFLNYLNNLTVDPIINSVQH---KKKGN--AP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRT+VACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTHVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNSNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE IWAAEL RYKLVEITPIGFAPTEVRRYTGGHERQKRVP Sbjct 236 LSPQIEGIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 280 >gb|AAF21592.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 481 bits (1237), Expect = 4e-134, Method: Composition-based stats. Identities = 234/304 (76%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD DHN C NT T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNNCDNT--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY K RT VTLSPQIESIWAA Sbjct 177 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYYNKIRTYVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITP GFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 237 ELGRYKLVEITPSGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAPGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21590.1| envelope glycoprotein [Simian immunodeficiency virus] Length=299 Score = 481 bits (1237), Expect = 4e-134, Method: Composition-based stats. Identities = 234/304 (76%), Positives = 251/304 (82%), Gaps = 5/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN C + + GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNNC---TTRRKGN--APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 176 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 295 Query 346 SQHL 349 SQHL Sbjct 296 SQHL 299 >pir||S46342 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN40) (fragment) gb|AAA21500.1| envelope protein Length=373 Score = 480 bits (1236), Expect = 6e-134, Method: Composition-based stats. Identities = 244/378 (64%), Positives = 280/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFALLKC D +Y GF C+NVSVV CT LMNTT+++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFALLKCRDTNYAGFGI-CNNVSVVSCTGLMNTTISSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SNDS +I LNKHY L + C RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWCH Sbjct 61 IWQKHGNSNDSVIIKLNKHYQLKIKCIRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LPKE+Y+GT + I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FQGDWKGAWKEVRETIVKLPKEKYQGTKNTTEIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DW +N+LNN ++D + N G ++ C +RTYVACHIRSV+ T+SKKT Sbjct 181 DWMVNWLNN---ESDSGKSVNVEGNTCTPEK-DRLCKKRTYVACHIRSVVNDWYTLSKKT 236 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT + L+Y KN TNVTL+ IE+++A EL RYKL+EI PIGFA Sbjct 237 YAPPREGHLECTSTVTSIIASLDYNNKNMTNVTLTANIENLYAYELGRYKLIEIKPIGFA 296 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRY G R+KRVPFV VQSQ LLAGILQQQKNLL Sbjct 297 PTEVRRYVGP-TREKRVPFVLGFLGFLGRAGAAMGATATALTVQSQQLLAGILQQQKNLL 355 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 356 AAVEQQQQMLKLTIWGVK 373 >gb|AAC59619.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 479 bits (1232), Expect = 2e-133, Method: Composition-based stats. Identities = 233/285 (81%), Positives = 247/285 (86%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS LIL NKHYNLTVTCKRPGNKT Sbjct 1 VHCTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNKHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYNLRLRQAWCHF NWKGAWKEV++E+V LPK+RYRGTN+ RI Sbjct 61 VLPVTIMAGLVFHSQKYNLRLRQAWCHFQGNWKGAWKEVRQELVKLPKDRYRGTNNTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 + QRQ+GDPE +NLWFNC GEFFY +MDWF +Y+NNLTVDADHN C +G K G R P Sbjct 121 YLQRQFGDPEASNLWFNCQGEFFYSRMDWFCHYINNLTVDADHNPC---NGQKKG--RVP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQ TYV HIRSVI TISKK YAPPREG L+C STVTGMTVELNY NRTNVT Sbjct 176 GPCVQSTYVVYHIRSVINDWYTISKKMYAPPREGTLQCMSTVTGMTVELNYRDNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIESIWAAEL RYKLVEITPIGFAPTEVRRYTGGHER KRVP Sbjct 236 LSPQIESIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERTKRVP 280 >gb|AAF21593.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 478 bits (1229), Expect = 4e-133, Method: Composition-based stats. Identities = 232/304 (76%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD+DHN C N T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDSDHNNCDNK--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I T SK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 177 HIRSIINDWYTASKFTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKR+P V VQ Sbjct 237 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRIPVVLGFLGFLAAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21594.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 478 bits (1229), Expect = 4e-133, Method: Composition-based stats. Identities = 232/304 (76%), Positives = 250/304 (82%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFSNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD+DHN C N T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDSDHNNCDNK--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I T+SK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 177 HIRSIINDWYTVSKFTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKR+P V VQ Sbjct 237 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRIPVVLGFLGFLAAAGTAMGATATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAC59615.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 473 bits (1218), Expect = 7e-132, Method: Composition-based stats. Identities = 230/285 (80%), Positives = 245/285 (85%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSY+ENRTQIWQKHR +N+S ++L NK+YNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYAENRTQIWQKHRVNNNSVIVLFNKYYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAG VFHSQKYN RLRQAWCHF NWKGAWKEVKE+I+ LPK+RYRGTN +I Sbjct 61 VLPVTIMAGRVFHSQKYNTRLRQAWCHFRGNWKGAWKEVKEKIIQLPKDRYRGTNRTDQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQWGDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVD C N + KS Sbjct 121 FLQRQWGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDRRRKPCNNNNTNKSS----- 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY +RTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNNNDRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQ+ESIWAAEL RYKLVEITPIGFAPT+VRRYTGGHERQKRVP Sbjct 236 LSPQVESIWAAELGRYKLVEITPIGFAPTDVRRYTGGHERQKRVP 280 >gb|AAF21541.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 471 bits (1212), Expect = 4e-131, Method: Composition-based stats. Identities = 231/305 (75%), Positives = 251/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFF CKMDWFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWFNCQGEFFSCKMDWFLNYINNLTVDANHNTNRCNMTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY +NRTNVTLSPQIESIWA Sbjct 178 CHIRSVVDDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQNRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLASLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAC99808.1| V2-V5 region [Simian immunodeficiency virus] Length=299 Score = 471 bits (1212), Expect = 4e-131, Method: Composition-based stats. Identities = 231/304 (75%), Positives = 251/304 (82%), Gaps = 5/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY+ENRTQIWQKHR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYTENRTQIWQKHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW EVK++IV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFQGNWRGAWNEVKQQIVKLPKDRYQGTNDTEKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNY+NNLTVDADH++CKN S K G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDADHHQCKNNS--KKG--KAPGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 177 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNTDNRTNVTLSPQIEGIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTE+RRY G RQKRVPFV VQ Sbjct 237 ELGRYKLVEITPIGFAPTEIRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 295 Query 346 SQHL 349 SQHL Sbjct 296 SQHL 299 >gb|AAF21534.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 471 bits (1211), Expect = 4e-131, Method: Composition-based stats. Identities = 231/305 (75%), Positives = 252/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWF C GEFFYCKMDWFLNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFTCQGEFFYCKMDWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAA99543.1| envelope protein gb|AAF21542.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 470 bits (1210), Expect = 7e-131, Method: Composition-based stats. Identities = 225/277 (81%), Positives = 246/277 (88%), Gaps = 4/277 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDAQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDWFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV 321 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFV 274 >gb|AAF21562.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 468 bits (1205), Expect = 2e-130, Method: Composition-based stats. Identities = 229/304 (75%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHNEC TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNECNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQ RVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQMRVPFVLGFLGFLGSPGSAMGAAATPPTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21543.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 468 bits (1204), Expect = 3e-130, Method: Composition-based stats. Identities = 228/305 (74%), Positives = 251/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSE++TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSESKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK E+V LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFSGNWRGAWEEVKREVVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDPNHNASRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21563.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 468 bits (1204), Expect = 3e-130, Method: Composition-based stats. Identities = 231/304 (75%), Positives = 248/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C N++ T G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKC-NSNNTSKG--KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21527.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 467 bits (1201), Expect = 6e-130, Method: Composition-based stats. Identities = 229/305 (75%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+ QIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKAQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIR V+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRFVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21546.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 466 bits (1199), Expect = 1e-129, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 244/304 (80%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21556.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 466 bits (1199), Expect = 1e-129, Method: Composition-based stats. Identities = 229/304 (75%), Positives = 245/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21555.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 466 bits (1198), Expect = 1e-129, Method: Composition-based stats. Identities = 230/304 (75%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNGCNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21547.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 465 bits (1196), Expect = 3e-129, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 247/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFY KMDWFLNYLNNLTVDADHN+C + + ++ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYYKMDWFLNYLNNLTVDADHNKCSSNNTSRG---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21528.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 465 bits (1196), Expect = 3e-129, Method: Composition-based stats. Identities = 229/305 (75%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGTV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVEL+Y ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELSYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG E QKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQESQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21531.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 464 bits (1194), Expect = 5e-129, Method: Composition-based stats. Identities = 226/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGN+T+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNRTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTN+ ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNEAQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLW +C G FFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWISCQGVFFYCKMDWFLNYINNLTVDPNHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFPAFLGATKTTMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21536.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 463 bits (1192), Expect = 7e-129, Method: Composition-based stats. Identities = 228/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYSQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 NLWFNC GEFFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 PNLWFNCQGEFFYCKMDWFLNYINNLTVDPNHNTNRCNKAGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYK+VE TPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKVVESTPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21551.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 463 bits (1191), Expect = 9e-129, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 245/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYL+NLTVDADH++C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLHNLTVDADHHKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21564.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 463 bits (1191), Expect = 9e-129, Method: Composition-based stats. Identities = 226/304 (74%), Positives = 243/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN +LRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTKLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21549.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 462 bits (1189), Expect = 2e-128, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFL YLNNLTVDADHN+C + K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLIYLNNLTVDADHNKCNEATKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IW+A Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWSA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21544.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 462 bits (1188), Expect = 2e-128, Method: Composition-based stats. Identities = 227/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 A LWFNC EFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 AILWFNCQEEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+S+ TYAPPREGHLEC STVTGMTV+LNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSELTYAPPREGHLECRSTVTGMTVDLNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21550.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 462 bits (1188), Expect = 2e-128, Method: Composition-based stats. Identities = 225/304 (74%), Positives = 242/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKAKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMT+ELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTIELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTNVRRYEAP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21565.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 460 bits (1183), Expect = 8e-128, Method: Composition-based stats. Identities = 224/304 (73%), Positives = 241/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKT+LPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTILPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNNCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IW A Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWPA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAP VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPPNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21561.1| envelope glycoprotein [Simian immunodeficiency virus] Length=304 Score = 460 bits (1183), Expect = 9e-128, Method: Composition-based stats. Identities = 223/282 (79%), Positives = 239/282 (84%), Gaps = 12/282 (4%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGF------APTEVRRYTGGHERQKRVPFV 321 EL RYKLVEITPIGF APT VRRY G RQKRVPFV Sbjct 236 ELGRYKLVEITPIGFAPTIVPAPTSVRRYEGP-SRQKRVPFV 276 >gb|AAC99807.1| V2-V5 region [Simian immunodeficiency virus] Length=297 Score = 459 bits (1182), Expect = 9e-128, Method: Composition-based stats. Identities = 225/304 (74%), Positives = 242/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPG KTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGTKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQK N RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSQKSNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITP+GFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPMGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21548.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 459 bits (1180), Expect = 2e-127, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 245/304 (80%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWC+F NW+GAW+EV+E+IV LPK+RY+GT D +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCNFQGNWRGAWREVREKIVKLPKDRYQGTIDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C T G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-TTKG------KAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21538.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 459 bits (1180), Expect = 2e-127, Method: Composition-based stats. Identities = 227/306 (74%), Positives = 246/306 (80%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHY LTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYTLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNARLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWFNC GEFFYCKMDWFLNY+ NLT A+H N C N G SG APGPC QRTYV Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYIYNLTEAANHITNRC-NKGGKTSG---APGPCAQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AA L RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 237 AAGLGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALT 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAF21554.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 458 bits (1179), Expect = 3e-127, Method: Composition-based stats. Identities = 230/304 (75%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C + + +K+ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNSNNTSKA---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21559.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 456 bits (1173), Expect = 1e-126, Method: Composition-based stats. Identities = 224/304 (73%), Positives = 240/304 (78%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPG KTVLPVTIMAGL Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGYKTVLPVTIMAGLA 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAW HF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWRHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHNEC TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNECNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT RRY G +QKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNGRRYEGP-SKQKRVPFVLGFLGFLGAAGTTMGAATTALAVQ 294 Query 346 SQHL 349 QHL Sbjct 295 YQHL 298 >gb|AAF21529.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 456 bits (1172), Expect = 2e-126, Method: Composition-based stats. Identities = 224/305 (73%), Positives = 247/305 (80%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQ+HR +NDS LILLNKHYNLTVTCKRPGNKT+LP+TIM +V Sbjct 1 STGLLLNGSYSENKTQIWQEHRVNNDSVLILLNKHYNLTVTCKRPGNKTLLPLTIMPAMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GT D ++I+ QRQ GDPE Sbjct 61 FHSQKYNTRLRQAWCHFTGNWRGAWEEVKREIVTLPKDRYQGTYDTQKIYLQRQLGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLW NC GEFFYCKM+WFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWLNCQGEFFYCKMEWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21540.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 456 bits (1172), Expect = 2e-126, Method: Composition-based stats. Identities = 226/306 (73%), Positives = 248/306 (81%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWF C GEF CKMDWFLNY+NNLTVDA+H N C N +G SG APGPCVQRTYV Sbjct 121 ANLWFTCQGEFSSCKMDWFLNYINNLTVDANHTTNRC-NKAGKTSG---APGPCVQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 A HIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ASHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVEITPIGFAPTEVRRYTGG +R +RVPFV Sbjct 237 AAELGRYKLVEITPIGFAPTEVRRYTGGQDRHERVPFVLGFLTFLGAAVTAMGAAATALT 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAF21560.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 454 bits (1168), Expect = 4e-126, Method: Composition-based stats. Identities = 222/304 (73%), Positives = 240/304 (78%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR NDS ++L KHYNLTV C+R GNKTVLPVT MAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVINDSVIVLFTKHYNLTVICRRSGNKTVLPVTTMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLR+AWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRKAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C + +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-------TSKGKAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21532.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 454 bits (1167), Expect = 5e-126, Method: Composition-based stats. Identities = 226/305 (74%), Positives = 247/305 (80%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTN ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNGTQKIYLQRQFGDPEV 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEF CKMDWFLNY+N LTVDA+HN + NT+G SG APGPCVQ TYVA Sbjct 121 ANLWFNCQGEFSSCKMDWFLNYINILTVDANHNTNRCNTTGKTSG---APGPCVQGTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TY PPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYPPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAC99809.1| V2-V5 region [Simian immunodeficiency virus] Length=300 Score = 453 bits (1165), Expect = 1e-125, Method: Composition-based stats. Identities = 220/304 (72%), Positives = 246/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQ+WQKHR +NDS +IL NKHYNLT TC RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQVWQKHRVNNDSVIILFNKHYNLTATCGRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVKEEI+ LP++R++GT D KRIF QRQ+GDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKEEIIKLPQDRFQGTTDTKRIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNCHGEFF+CK+DWF NYLNNLT + DHN+C++ + S N+RAPGP VQRTYVAC Sbjct 121 ANLWFNCHGEFFFCKLDWFPNYLNNLTGNPDHNKCEHNN---SSNRRAPGPRVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI +I+K+TYAPPREGHL+CTS VTGMTVEL Y KNRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYSITKRTYAPPREGHLQCTSPVTGMTVELIYNTKNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT+VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTDVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAC99810.1| V2-V5 region [Simian immunodeficiency virus] Length=300 Score = 451 bits (1161), Expect = 3e-125, Method: Composition-based stats. Identities = 220/304 (72%), Positives = 241/304 (79%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQK+ SNDS LIL NKHYNLTVTC+RPGNKT LPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQKNGNSNDSVLILFNKHYNLTVTCRRPGNKTALPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKY RLRQAWCHF NW+GAW+EV+++++ LP + Y+GT + +RI+ QR++GDPE Sbjct 61 FHSQKYYTRLRQAWCHFQGNWEGAWREVQKKLIGLPTDNYQGTINTERIYLQREFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLW C GEF YCKMDW LNY+NNLTVDADHN C+NTS APGPCVQRTYVAC Sbjct 121 DNLWSTCQGEFLYCKMDWLLNYINNLTVDADHNRCQNTSDKGP----APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI T+SKKTYAPPREGHLECTSTVTGMTVELNY KNRTNVTLSPQI+ IWAA Sbjct 177 HIRSVINDWYTVSKKTYAPPREGHLECTSTVTGMTVELNYNNKNRTNVTLSPQIDGIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRYTGGHERQKR PFV VQ Sbjct 237 ELGRYKLVEITPIGFAPTNVRRYTGGHERQKRAPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21557.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 451 bits (1160), Expect = 3e-125, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 246/304 (80%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHY LTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYILTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C T+ G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-----TRKG--KAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21552.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 451 bits (1159), Expect = 4e-125, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 246/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+G PE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGHPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFY KMDWFLNYLNNLTVDADHN+C +++ +K +APGPCV RTYVAC Sbjct 121 ANLWFNCQGEFFYYKMDWFLNYLNNLTVDADHNKCDSSNTSKG---KAPGPCVHRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21558.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 447 bits (1149), Expect = 7e-124, Method: Composition-based stats. Identities = 223/304 (73%), Positives = 244/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GT D +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTTDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNL VDADHN+C + + ++ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLPVDADHNQCSSNNTSRG---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPR GHL+CTSTVTGMTVELNY NRTNVTLSPQIE IW A Sbjct 178 HIRSVINDWYTISKKTYAPPRGGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWPA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21553.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 443 bits (1140), Expect = 7e-123, Method: Composition-based stats. Identities = 223/305 (73%), Positives = 239/305 (78%), Gaps = 8/305 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYHGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMD-WFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMD WFLNYLNN VDADHN C T+ N +APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDVWFLNYLNN-PVDADHNVCNKTT-----NGKAPGPCVQRTYVA 174 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHI +VI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IW Sbjct 175 CHISTVINDWCTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWP 234 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITP GFAPT VRRY G RQKRVPFV V Sbjct 235 AELGRYKLVEITPSGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTV 293 Query 345 QSQHL 349 QSQHL Sbjct 294 QSQHL 298 >gb|AAF21526.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 441 bits (1135), Expect = 3e-122, Method: Composition-based stats. Identities = 221/306 (72%), Positives = 243/306 (79%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LP++RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVTLPQDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWF GEFF C+MDW NY+ L DA+H N C N +G SG APGPCVQRTYV Sbjct 121 ANLWFKRQGEFFSCEMDWVPNYIYILRADANHTTNRC-NKTGKTSG---APGPCVQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLEFRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 237 AAELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALA 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAX09393.1| envelope glycoprotein [Simian immunodeficiency virus] Length=249 Score = 441 bits (1134), Expect = 3e-122, Method: Composition-based stats. Identities = 214/253 (84%), Positives = 227/253 (89%), Gaps = 4/253 (1%) Query 37 CTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVL 96 CT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS L+L NK+YNLTVTCKRPGNKTVL Sbjct 1 CTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLVLFNKYYNLTVTCKRPGNKTVL 60 Query 97 PVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFF 156 PVTIMAGLVFHSQKYN+RLRQAWCHF NWKGAWKEVK+E+V LPK+RY+GTND ++IF Sbjct 61 PVTIMAGLVFHSQKYNMRLRQAWCHFQGNWKGAWKEVKQELVKLPKDRYQGTNDTEKIFL 120 Query 157 QRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGP 216 QRQ+GDPE ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C +T K GN APGP Sbjct 121 QRQFGDPEAANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNSCNSTK--KGGN--APGP 176 Query 217 CVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLS 276 CVQRTYVACHIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNYI NRTNVTLS Sbjct 177 CVQRTYVACHIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYIKNNRTNVTLS 236 Query 277 PQIESIWAAELDR 289 PQIESIWAAEL R Sbjct 237 PQIESIWAAELGR 249 >gb|AAX09392.1| envelope glycoprotein [Simian immunodeficiency virus] Length=314 Score = 432 bits (1110), Expect = 2e-119, Method: Composition-based stats. Identities = 212/315 (67%), Positives = 245/315 (77%), Gaps = 11/315 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D +Y G +C+NVSV CT L+NTTV+TG+ +NGSY+ENRT+ Sbjct 11 FRLRYCAPAGYALLRCRDKNYTG-SNDCTNVSVSACTRLINTTVSTGIGINGSYTENRTE 69 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SNDS +I LN++YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +L+QAWC Sbjct 70 IWQEDGNSNDSVIIRLNRYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLKQAWCW 129 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+ AW+EVKEEIV LP RY+GTND +I+ QRQWGDPE +FNC GEFFYCKM Sbjct 130 FGGKWRQAWQEVKEEIVKLPPARYQGTNDTSKIYLQRQWGDPEAEFFFFNCQGEFFYCKM 189 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN+C T+ K C QRTYV CHIR V+ T+SKKT Sbjct 190 DWFLNYLNNQSVDPDHNKCNKTNDKK---------CWQRTYVPCHIRQVVNDWYTLSKKT 240 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREG LEC ST T + VE+NY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 241 YAPPREGQLECNSTATALYVEINYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 300 Query 302 PTEVRRYTGGHERQK 316 PT+VRRYTG ERQK Sbjct 301 PTDVRRYTGP-ERQK 314 >gb|AAF21530.1| envelope glycoprotein [Simian immunodeficiency virus] Length=303 Score = 427 bits (1099), Expect = 4e-118, Method: Composition-based stats. Identities = 215/306 (70%), Positives = 236/306 (77%), Gaps = 5/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMA-GL 104 +TGLLL GSYSEN+TQIWQ+HR +NDS LILLNKH+NLTVTC RPGNKT L G+ Sbjct 1 STGLLLIGSYSENKTQIWQEHRVNNDSVLILLNKHHNLTVTCMRPGNKTTLACHYHGPGM 60 Query 105 VFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPE 164 VFHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 VFHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPE 120 Query 165 TANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYV 223 ANLWFNC GEFF CKMDWFLNY+ LTVDA+HN + T+G SG APGPCVQRTYV Sbjct 121 AANLWFNCQGEFFSCKMDWFLNYIYTLTVDANHNTNRCTTTGKTSG---APGPCVQRTYV 177 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T K TY PPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 178 ACHIRSVVNDWYTDKKLTYPPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 237 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVE TPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 238 AAELGRYKLVEFTPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGTTGTPMGAAATALT 297 Query 344 VQSQHL 349 VQSQHL Sbjct 298 VQSQHL 303 >gb|AAA47593.1| glycoprotein 120 Length=486 Score = 421 bits (1081), Expect = 6e-116, Method: Composition-based stats. Identities = 207/311 (66%), Positives = 241/311 (77%), Gaps = 10/311 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPA A+LKC D +Y GF T C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 180 LRLRYCAPAAVAILKCKDTNYTGFGT-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 238 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SNDS +I LNKHYNLT+ C+RPGNKTVLPVTIMAG+VFHSQKYN +LRQAWCH Sbjct 239 IWQKHGVSNDSVIIKLNKHYNLTILCRRPGNKTVLPVTIMAGMVFHSQKYNTKLRQAWCH 298 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LPK +Y+GTND K+I+ +RQWGDPE A++WFNC GEFFYC Sbjct 299 FQGDWKGAWKEVRETIVKLPKHKYQGTNDTKKIWLRRQWGDPEAASIWFNCLGEFFYCTP 358 Query 182 DWFLNYLNNLT-----VDADHNECKN-TSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLE 235 DWFLNYLNN + D + N C N TSG +G+ R C++RTYV HIRSV+ Sbjct 359 DWFLNYLNNESSEGSFTDVEGNRCSNITSGGLTGSTRK---CLKRTYVGLHIRSVVNDWY 415 Query 236 TISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEI 295 T+ +K YAPPREGHLEC STVT M V L+Y KN TNVTL+ +E+IWA EL RYKL+EI Sbjct 416 TLLQKRYAPPREGHLECRSTVTSMLVSLDYNDKNMTNVTLTANLENIWAYELGRYKLIEI 475 Query 296 TPIGFAPTEVR 306 PIGFAPTEVR Sbjct 476 KPIGFAPTEVR 486 >gb|AAF21537.1| envelope glycoprotein [Simian immunodeficiency virus] Length=257 Score = 393 bits (1009), Expect = 1e-107, Method: Composition-based stats. Identities = 194/250 (77%), Positives = 212/250 (84%), Gaps = 6/250 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV PK+RY+GTND ++I+ RQ GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKSPKDRYQGTNDTQKIYLHRQVGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLW NC GEFFYCKMDW LNY+NNLTVDA+H N C N G SG APGPC QRTYV Sbjct 121 ANLWINCQGEFFYCKMDWPLNYINNLTVDANHDANRC-NEGGKTSG---APGPCAQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLV 293 AAEL RYKLV Sbjct 237 AAELGRYKLV 246 >gb|AAF21545.1| envelope glycoprotein [Simian immunodeficiency virus] Length=252 Score = 374 bits (959), Expect = 8e-102, Method: Composition-based stats. Identities = 181/254 (71%), Positives = 199/254 (78%), Gaps = 2/254 (0%) Query 96 LPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIF 155 +PVTIMAG+VFHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ Sbjct 1 MPVTIMAGMVFHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIY 60 Query 156 FQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPG 215 QRQ+GDPE ANLWFNC GEFFYCKMDW LNY+NNLTVD +HN + G K+ APG Sbjct 61 LQRQFGDPEAANLWFNCQGEFFYCKMDWLLNYINNLTVDPNHNANRCNKGGKTSG--APG 118 Query 216 PCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTL 275 PCVQRTYVACHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTL Sbjct 119 PCVQRTYVACHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTL 178 Query 276 SPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXX 335 SPQIESIWAAEL YKLVEITPIGFAPTEVRRYTGG E QKRVPFV Sbjct 179 SPQIESIWAAELGGYKLVEITPIGFAPTEVRRYTGGQESQKRVPFVLGFLAFLGAAGTAM 238 Query 336 XXXXXXXXVQSQHL 349 VQSQHL Sbjct 239 GAAATALTVQSQHL 252 >dbj|BAA82439.1| envelope glycoprotein [Simian immunodeficiency virus - agm] Length=214 Score = 370 bits (950), Expect = 8e-101, Method: Composition-based stats. Identities = 176/217 (81%), Positives = 189/217 (87%), Gaps = 3/217 (1%) Query 87 CKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYR 146 C+RPGNKTVLPVTIMAGLV HSQKYN RLRQAWCHF NW+GAW+EV+E+IV LPKERY+ Sbjct 1 CRRPGNKTVLPVTIMAGLVIHSQKYNTRLRQAWCHFQGNWRGAWREVREKIVQLPKERYQ 60 Query 147 GTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGT 206 GTND +I+ QRQWGDPE ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C NT Sbjct 61 GTNDTSQIYLQRQWGDPEAANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNVCNNTGKK 120 Query 207 KSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYI 266 KS +APGPC QRTYVACHIRSV+ T+SK TYAPPREGHL+CTSTVT M VELNY Sbjct 121 KS---KAPGPCAQRTYVACHIRSVVNDWYTLSKLTYAPPREGHLQCTSTVTIMAVELNYN 177 Query 267 PKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFAPT 303 PKNRTNVTLSPQIE+IWAAEL RYKLVEITPIGFAPT Sbjct 178 PKNRTNVTLSPQIENIWAAELGRYKLVEITPIGFAPT 214 >dbj|BAA82408.1| env of SIVagm [Simian immunodeficiency virus - agm] Length=212 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 171/217 (78%), Positives = 188/217 (86%), Gaps = 5/217 (2%) Query 87 CKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYR 146 C+RPGNKTVLPVTIMAGLVFH QKYN RLRQAWCHF NW+GAW+EV+++IV LPKERY+ Sbjct 1 CRRPGNKTVLPVTIMAGLVFHFQKYNNRLRQAWCHFQDNWRGAWREVRKKIVQLPKERYQ 60 Query 147 GTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGT 206 GTND +I QRQWGDPE ANLWFNC G+FFYCK+DWFLNYLNNLTVDADHN C +T Sbjct 61 GTNDTSQIHLQRQWGDPEAANLWFNCQGKFFYCKLDWFLNYLNNLTVDADHNPCNSTRKG 120 Query 207 KSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYI 266 K APGPCVQRTYVACHIRSV+ T+SK TYAPPREGHL+C+STVTGMTVELNY Sbjct 121 K-----APGPCVQRTYVACHIRSVVNDWYTLSKLTYAPPREGHLQCSSTVTGMTVELNYN 175 Query 267 PKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFAPT 303 KNRTNVTLSPQIE+IWAAEL RYKLV+ITPIGFAPT Sbjct 176 SKNRTNVTLSPQIENIWAAELGRYKLVKITPIGFAPT 212 >gb|AAT41729.1| Env [Simian immunodeficiency virus] Length=737 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 181/379 (47%), Positives = 238/379 (62%), Gaps = 16/379 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T + NG+ +ENRT Sbjct 229 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWVGFNGTRAENRTY 288 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GL+FHSQ N R +QAWC Sbjct 289 IYWHSRS--NRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLIFHSQSINKRPKQAWCW 346 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +W+GA +EVKE IV P RY GTN+ K I + GDPE +W NC GEF YCK Sbjct 347 FGGSWRGAIQEVKETIVKHP--RYTGTNNTKYINLTAPRGGDPEVTFMWTNCRGEFLYCK 404 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NTSG+ ++ +R YV CHIR +I + K Sbjct 405 MNWFLNWV----------EDRNTSGSL-WTEQTKAEQQKRNYVPCHIRQIINTWHRVGKN 453 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N+TN+++S ++ ++ EL YKLVEITPIG Sbjct 454 VYLPPREGDLTCNSTVTSLIADIDWIDGNQTNISMSAEVAELYRLELGDYKLVEITPIGL 513 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT +RRYT G R KR FV QS+ LLAGI+QQQ+ L Sbjct 514 APTSIRRYTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQL 573 Query 361 LAAVEAQQQMLKLTIWGVK 379 L V+ QQ++L+LT+WG K Sbjct 574 LDVVKRQQELLRLTVWGTK 592 >gb|AAP46095.1| envelope glycoprotein [Simian immunodeficiency virus] Length=875 Score = 331 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 186/380 (48%), Positives = 230/380 (60%), Gaps = 26/380 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGNWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLN++ E +NT+ K +R YV CHIR +I + K Sbjct 404 MDWFLNWV----------EDRNTTKQKP----------KRNYVPCHIRQIINTWHKVGKN 443 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I NRTN+T+S ++ ++ EL YKLVEITPIG Sbjct 444 VYLPPREGDLACNSTVTSLIANIDWIDGNRTNITMSAEVAELYRLELGDYKLVEITPIGL 503 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY TGG R KR FV QS+ LLAGI QQQ+ Sbjct 504 APTSVRRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIGQQQQQ 563 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 564 LLDVVKRQQELLRLTVWGTK 583 >gb|AAC68662.1| Env [Simian immunodeficiency virus] Length=885 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 185/385 (48%), Positives = 237/385 (61%), Gaps = 28/385 (7%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 233 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 292 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GL+FHSQ N R +QAWC Sbjct 293 IYWHSRS--NRTIISLNKYYNLTIRCRRPGNKTVLPVTIMSGLIFHSQPINERPKQAWCW 350 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F +W+ A +EVKE IV P RY GTN+ K+I G DPE +W NC GEF YCK Sbjct 351 FGGSWREAIQEVKETIVKHP--RYTGTNETKKINLTAPGGGDPEVTFMWTNCRGEFLYCK 408 Query 181 MDWFLNYLNNLTVDADHNECKNTSG------TKSGNKRAPGPCVQRTYVACHIRSVIIWL 234 M+WFLN++ E +NTSG TK+ K+ R YV CHIR +I Sbjct 409 MNWFLNWV----------EDRNTSGSLWTQQTKADEKK-------RNYVPCHIRQIINTW 451 Query 235 ETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVE 294 + K Y PPREG L C STVT + ++++I N+TN+T+S ++ ++ EL YKLVE Sbjct 452 HRVGKNVYLPPREGDLTCNSTVTSLIADIDWIDGNQTNITMSAEVAELYRLELGDYKLVE 511 Query 295 ITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGIL 354 ITPIG APT VRRYT G R KR FV QS+ LLAGI+ Sbjct 512 ITPIGLAPTSVRRYTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTRSAQSRTLLAGIV 571 Query 355 QQQKNLLAAVEAQQQMLKLTIWGVK 379 QQQ+ LL V+ QQ++L+LT+WG K Sbjct 572 QQQQQLLDVVKRQQELLRLTVWGTK 596 >gb|AAK64201.1| env protein [Simian immunodeficiency virus 17E-Cl] Length=879 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ+ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQAWCW 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTN+ +I + GDPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + K Sbjct 404 MNWFLNWV----------EDRNTANQK------PKEQHKRNYVPCHIRQIINTWHKVGKN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTDVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAO67286.1| envelope glycoprotein [Simian immunodeficiency virus] Length=887 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 234/380 (61%), Gaps = 17/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 231 IRFRYCAPPGYALLRCNDSNYSGFAPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 290 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ H SN + +I LNK+YNLT+ CKRPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 291 IYW-HGNSNRT-IITLNKYYNLTIKCKRPGNKTVLPVTIMSGLVFHSQTINTRPKQAWCW 348 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F NW A +EVKE +V P RY GTND ++I G+PE +W NC GEF YCK Sbjct 349 FEGNWSKAIQEVKETLVKHP--RYTGTNDTRKINLTAPARGNPEVTFMWTNCRGEFLYCK 406 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ D D N + +S K+ R YV CHIR +I + K Sbjct 407 MNWFLNWVE----DRDQNSNRWKQQKESEQKK-------RNYVPCHIRQIINTWHKVGKN 455 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N TN+T+S ++ ++ EL YKLVEITPIG Sbjct 456 VYLPPREGDLTCNSTVTSLIAKIDWINNNETNITMSAEVAELYRLELGDYKLVEITPIGL 515 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+VRRY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 516 APTDVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQ 575 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 576 LLDVVKRQQELLRLTVWGTK 595 >gb|AAP46096.1| envelope glycoprotein [Simian immunodeficiency virus] Length=873 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 230/380 (60%), Gaps = 26/380 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 226 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 285 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 286 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 343 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GT D +I G DPE +W NC GEF YCK Sbjct 344 FGGNWKDAIKEVKQTIVKHP--RYTGTKDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 401 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLN++ E +NT+ K +R YV CHIR +I + K Sbjct 402 MDWFLNWV----------EDRNTTKQKP----------KRNYVPCHIRQIINTWHKVGKN 441 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 442 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 501 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 502 APTSVRRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 561 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 562 LLDVVKRQQELLRLTVWGTK 581 >gb|AAA91937.1| env protein Length=880 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 20/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ + ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYW--HSKDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTN+ +I G DPE +W NC GEF YCK Sbjct 346 FEGNWKEAIKEVKQTIVKHP--RYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E KN +GT + P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDKNLTGTT----QKPQERHKRNYVPCHIRQIINTWHKVGRN 449 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 450 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 509 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 510 APTNVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 569 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 570 LLDVVKRQQELLRLTVWGTK 589 >gb|AAV69864.1| envelope glycoprotein [SIV vector pCLN8] Length=735 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 20/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ + ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYW--HSKDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTN+ +I G DPE +W NC GEF YCK Sbjct 346 FEGNWKEAIKEVKQTIVKHP--RYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E KN +GT + P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDKNLTGTT----QKPQERHKRNYVPCHIRQIINTWHKVGRN 449 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 450 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 509 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 510 APTNVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 569 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 570 LLDVVKRQQELLRLTVWGTK 589 >gb|AAZ52606.1| envelope glycoprotein [Simian immunodeficiency virus SIVmac] Length=879 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 231/380 (60%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R RQAWC Sbjct 288 IYWHGR--DNGTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPRQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDRNTTNQK------PNEQHKRNYVPCHIRQIINTWHKVGRN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTHVKRYTTGGTSRNKRGVFVLGSLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAX85828.2| envelope glycoprotein [Simian immunodeficiency virus] Length=886 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 187/382 (48%), Positives = 236/382 (61%), Gaps = 21/382 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 230 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 289 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 290 IYWHGRS--NRTIISLNKFYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 347 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +WK A +EVKE IV P RY GTND K+I + GDPE +W NC GEF YCK Sbjct 348 FGGSWKKAIQEVKETIVKHP--RYTGTNDTKKINLTAPRGGDPEVTFMWTNCRGEFLYCK 405 Query 181 MDWFLNYLNNLTVDADHNECKNTSGT--KSGNKRAPGPCVQRTYVACHIRSVIIWLETIS 238 M+WFLN++ E ++T+G K N+ G +R YV CHIR +I + Sbjct 406 MNWFLNWV----------EDRDTNGNIWKQQNR---GEQQKRNYVPCHIRQIINTWHKVG 452 Query 239 KKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPI 298 K Y PPREG L C STVT + +++I NRTN+T+S ++ ++ EL YKLVEITPI Sbjct 453 KNVYLPPREGDLTCNSTVTSLIANIDWIDGNRTNITMSAEVAELYRLELGDYKLVEITPI 512 Query 299 GFAPTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQ 357 G APT VRRY T G R KR FV QS+ LLAGI+QQQ Sbjct 513 GLAPTNVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQ 572 Query 358 KNLLAAVEAQQQMLKLTIWGVK 379 + LL V+ QQ++L+LT+WG K Sbjct 573 QQLLDVVKRQQELLRLTVWGTK 594 >gb|AAK64192.1| truncated envelope glycoprotein [Simian immunodeficiency virus 17E-Fr] Length=763 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ+ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQAWCW 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTN+ +I + GDPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + K Sbjct 404 MNWFLNWV----------EDRNTANQK------PKEQHKRNYVPCHIRQIINTWHKVGKN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTDVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAA47765.1| envelope polyprotein Length=773 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 235/380 (61%), Gaps = 18/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF NC+ V V CT +M T +T NG+ +ENRT Sbjct 236 IRFRYCAPPGYALLRCNDSNYSGFAPNCTKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 295 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 296 IYWHGRS--NRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 353 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A +EVKE +V P RY GTND K+I G DPE ++W NC GEF YCK Sbjct 354 FGGEWKKAIQEVKETLVKHP--RYTGTNDTKQIKLTAPGGGDPEVTHMWTNCRGEFLYCK 411 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ ++ KN S S N++ +R YV CHIR +I + K Sbjct 412 MNWFLNWVEDI---------KNGSRWTSQNQKERQ---RRNYVPCHIRQIINTWHKVGKN 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + E+++I N TN+T+S ++ ++ EL YKLVEITPI F Sbjct 460 VYLPPREGDLTCNSTVTSLIAEIDWINGNETNITMSAEVAQLYRLELGDYKLVEITPIAF 519 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 520 APTSVKRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTLSAQSRTLLAGIVQQQQQ 579 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V QQ++L+LT+WG K Sbjct 580 LLDVVTRQQELLRLTVWGTK 599 >gb|AAA47773.1| envelope polyprotein Length=773 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 235/380 (61%), Gaps = 18/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF NC+ V V CT +M T +T NG+ +ENRT Sbjct 236 IRFRYCAPPGYALLRCNDSNYSGFAPNCTKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 295 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 296 IYWHGRS--NRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 353 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A +EVKE +V P RY GTND K+I G DPE ++W NC GEF YCK Sbjct 354 FGGEWKKAIQEVKETLVKHP--RYTGTNDTKQIKLTAPGGGDPEVTHMWTNCRGEFLYCK 411 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ ++ KN S S N++ +R YV CHIR +I + K Sbjct 412 MNWFLNWVEDI---------KNGSRWTSQNQKERQ---RRNYVPCHIRQIINTWHKVGKN 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + E+++I N TN+T+S ++ ++ EL YKLVEITPI F Sbjct 460 VYLPPREGDLTCNSTVTSLIAEIDWINGNETNITMSAEVAQLYRLELGDYKLVEITPIAF 519 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 520 APTSVKRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTLSAQSRTLLAGIVQQQQQ 579 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V QQ++L+LT+WG K Sbjct 580 LLDVVTRQQELLRLTVWGTK 599 >gb|AAX85833.2| envelope glycoprotein [Simian immunodeficiency virus] Length=857 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 185/383 (48%), Positives = 237/383 (61%), Gaps = 23/383 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 232 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 291 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 292 IYWHGRS--NRTIISLNKFYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 349 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +WK A +EVKE IV P RY GTND K+I + GDPE +W NC GEF YCK Sbjct 350 FGGSWKKAIQEVKETIVKHP--RYTGTNDTKKINLTAPRGGDPEVTFMWTNCRGEFLYCK 407 Query 181 MDWFLNYLNNLTVDADHNECKNTSGT---KSGNKRAPGPCVQRTYVACHIRSVIIWLETI 237 M+WFLN++ E ++T+GT + NK +R YV CHIR ++ + Sbjct 408 MNWFLNWV----------EDRDTNGTIWKQQNNKEQQ----KRNYVPCHIRQIVNTWHKV 453 Query 238 SKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITP 297 K Y PPREG L C STVT + ++++I N+TN+T+S ++ ++ EL YKLVEITP Sbjct 454 GKNVYLPPREGDLTCNSTVTSLIADIDWIDNNQTNITMSAEVAELYRLELGDYKLVEITP 513 Query 298 IGFAPTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQ 356 IG APT VRRY T G R KR FV QS+ LLAGI+QQ Sbjct 514 IGLAPTSVRRYTTTGAPRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQ 573 Query 357 QKNLLAAVEAQQQMLKLTIWGVK 379 Q+ LL V+ QQ++L+LT+WG K Sbjct 574 QQQLLDVVKRQQELLRLTVWGTK 596 >gb|AAZ52607.1| envelope glycoprotein [Simian immunodeficiency virus SIVmac] Length=879 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 232/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPRQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDRNTTNQK------PNEQHKRNYVPCHIRQIINTRHKVGRN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV X QS+ LLAGI+QQQ+ Sbjct 508 APTHVKRYTTGGTSRNKRGVFVLGFXGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAO67291.1| envelope glycoprotein [Simian immunodeficiency virus] Length=887 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 233/380 (61%), Gaps = 17/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 231 IRFRYCAPPGYALLRCNDSNYSGFAPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 290 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ H SN + +I LNK+YNLT+ CKRPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 291 IYW-HGNSNRT-IISLNKYYNLTIRCKRPGNKTVLPVTIMSGLVFHSQTINTRPKQAWCW 348 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F NW A +EVKE +V P RY GTND ++I G+PE +W NC GEF YCK Sbjct 349 FEGNWSKAIQEVKETLVKHP--RYTGTNDTRKINLTAPARGNPEVTFMWTNCRGEFLYCK 406 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ D D N + +S K+ R YV CHIR +I + K Sbjct 407 MNWFLNWVE----DRDQNSNRWKQQKESEQKK-------RNYVPCHIRQIINAWHKVGKN 455 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N TN+T+S ++ ++ EL YKLVEITPIG Sbjct 456 VYLPPREGDLTCNSTVTSLIAKIDWINNNETNITMSAEVAELYRLELGDYKLVEITPIGL 515 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 516 APTNVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQ 575 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 576 LLDVVKRQQELLRLTVWGTK 595 Query= gi|333333|pir|TVFV2E|TVFV2E envelope protein Length=379 Score E Sequences producing significant alignments: (Bits) Value gb|AAA99542.1| envelope protein 702 0.0 gb|AAA99544.1| envelope protein 635 1e-180 sp|P27977|ENV_SIVVG Envelope glycoprotein gp160 precursor (En... 619 2e-175 pir||S46345 env polyprotein - simian immunodeficiency virus S... 617 5e-175 dbj|BAF32565.1| env polyprotein [Simian immunodeficiency virus] 610 3e-173 sp|P27757|ENV_SIVV1 Envelope glycoprotein gp160 precursor (En... 609 8e-173 gb|AAC99812.1| V2-gp41 junction [Simian immunodeficiency virus] 608 2e-172 gb|AAA64263.1| envelope 605 2e-171 sp|P05886|ENV_SIVVT Envelope glycoprotein gp160 precursor (En... 602 2e-170 pir||S46344 env polyprotein - simian immunodeficiency virus S... 588 2e-166 pir||S46352 env polyprotein - simian immunodeficiency virus S... 509 1e-142 pir||S46338 env polyprotein - simian immunodeficiency virus S... 508 2e-142 pir||S46341 env polyprotein - simian immunodeficiency virus S... 503 8e-141 gb|AAC33802.1| envelope glycoprotein [Simian immunodeficiency vi 501 2e-140 pir||S46343 env polyprotein - simian immunodeficiency virus S... 500 7e-140 gb|AAC33803.1| envelope glycoprotein [Simian immunodeficiency vi 499 1e-139 pir||S46337 env polyprotein - simian immunodeficiency virus S... 498 3e-139 pir||S46339 env polyprotein - simian immunodeficiency virus S... 493 8e-138 gb|AAC59620.1| envelope glycoprotein [Simian immunodeficiency vi 492 2e-137 gb|AAC99811.1| V2-V5 region [Simian immunodeficiency virus] >... 490 6e-137 gb|AAC59617.1| envelope glycoprotein [Simian immunodeficiency vi 489 1e-136 ref|NP_054372.1| envelope protein [Simian immunodeficiency vi... 486 7e-136 pir||S46335 env polyprotein - simian immunodeficiency virus S... 486 1e-135 gb|AAC59616.1| envelope glycoprotein [Simian immunodeficiency vi 485 2e-135 gb|AAF21588.1| envelope glycoprotein [Simian immunodeficiency vi 485 2e-135 gb|AAC59621.1| envelope glycoprotein [Simian immunodeficiency vi 484 3e-135 pir||S46340 env polyprotein - simian immunodeficiency virus S... 484 3e-135 pir||S46336 env polyprotein - simian immunodeficiency virus S... 484 4e-135 gb|AAC57057.1| envelope glycoprotein [Simian immunodeficiency... 484 5e-135 gb|AAF21595.1| envelope glycoprotein [Simian immunodeficiency vi 483 7e-135 gb|AAC59618.1| envelope glycoprotein [Simian immunodeficiency vi 481 3e-134 gb|AAF21592.1| envelope glycoprotein [Simian immunodeficiency vi 481 4e-134 gb|AAF21590.1| envelope glycoprotein [Simian immunodeficiency vi 481 4e-134 pir||S46342 env polyprotein - simian immunodeficiency virus S... 480 6e-134 gb|AAC59619.1| envelope glycoprotein [Simian immunodeficiency vi 479 2e-133 gb|AAF21593.1| envelope glycoprotein [Simian immunodeficiency vi 478 4e-133 gb|AAF21594.1| envelope glycoprotein [Simian immunodeficiency vi 478 4e-133 gb|AAC59615.1| envelope glycoprotein [Simian immunodeficiency vi 473 7e-132 gb|AAF21541.1| envelope glycoprotein [Simian immunodeficiency vi 471 4e-131 gb|AAC99808.1| V2-V5 region [Simian immunodeficiency virus] 471 4e-131 gb|AAF21534.1| envelope glycoprotein [Simian immunodeficiency vi 471 4e-131 gb|AAA99543.1| envelope protein >gb|AAF21542.1| envelope glyc... 470 7e-131 gb|AAF21562.1| envelope glycoprotein [Simian immunodeficiency vi 468 2e-130 gb|AAF21543.1| envelope glycoprotein [Simian immunodeficiency vi 468 3e-130 gb|AAF21563.1| envelope glycoprotein [Simian immunodeficiency vi 468 3e-130 gb|AAF21527.1| envelope glycoprotein [Simian immunodeficiency vi 467 6e-130 gb|AAF21546.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21556.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21555.1| envelope glycoprotein [Simian immunodeficiency vi 466 1e-129 gb|AAF21547.1| envelope glycoprotein [Simian immunodeficiency vi 465 3e-129 gb|AAF21528.1| envelope glycoprotein [Simian immunodeficiency vi 465 3e-129 gb|AAF21531.1| envelope glycoprotein [Simian immunodeficiency vi 464 5e-129 gb|AAF21536.1| envelope glycoprotein [Simian immunodeficiency vi 463 7e-129 gb|AAF21551.1| envelope glycoprotein [Simian immunodeficiency vi 463 9e-129 gb|AAF21564.1| envelope glycoprotein [Simian immunodeficiency vi 463 9e-129 gb|AAF21549.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21544.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21550.1| envelope glycoprotein [Simian immunodeficiency vi 462 2e-128 gb|AAF21565.1| envelope glycoprotein [Simian immunodeficiency vi 460 8e-128 gb|AAF21561.1| envelope glycoprotein [Simian immunodeficiency vi 460 9e-128 gb|AAC99807.1| V2-V5 region [Simian immunodeficiency virus] 459 9e-128 gb|AAF21548.1| envelope glycoprotein [Simian immunodeficiency vi 459 2e-127 gb|AAF21538.1| envelope glycoprotein [Simian immunodeficiency vi 459 2e-127 gb|AAF21554.1| envelope glycoprotein [Simian immunodeficiency vi 458 3e-127 gb|AAF21559.1| envelope glycoprotein [Simian immunodeficiency vi 456 1e-126 gb|AAF21529.1| envelope glycoprotein [Simian immunodeficiency vi 456 2e-126 gb|AAF21540.1| envelope glycoprotein [Simian immunodeficiency vi 456 2e-126 gb|AAF21560.1| envelope glycoprotein [Simian immunodeficiency vi 454 4e-126 gb|AAF21532.1| envelope glycoprotein [Simian immunodeficiency vi 454 5e-126 gb|AAC99809.1| V2-V5 region [Simian immunodeficiency virus] 453 1e-125 gb|AAC99810.1| V2-V5 region [Simian immunodeficiency virus] 451 3e-125 gb|AAF21557.1| envelope glycoprotein [Simian immunodeficiency vi 451 3e-125 gb|AAF21552.1| envelope glycoprotein [Simian immunodeficiency vi 451 4e-125 gb|AAF21558.1| envelope glycoprotein [Simian immunodeficiency vi 447 7e-124 gb|AAF21553.1| envelope glycoprotein [Simian immunodeficiency vi 443 7e-123 gb|AAF21526.1| envelope glycoprotein [Simian immunodeficiency vi 441 3e-122 gb|AAX09393.1| envelope glycoprotein [Simian immunodeficiency vi 441 3e-122 gb|AAX09392.1| envelope glycoprotein [Simian immunodeficiency vi 432 2e-119 gb|AAF21530.1| envelope glycoprotein [Simian immunodeficiency vi 427 4e-118 gb|AAA47593.1| glycoprotein 120 421 6e-116 gb|AAF21537.1| envelope glycoprotein [Simian immunodeficiency vi 393 1e-107 gb|AAF21545.1| envelope glycoprotein [Simian immunodeficiency vi 374 8e-102 dbj|BAA82439.1| envelope glycoprotein [Simian immunodeficiency v 370 8e-101 dbj|BAA82408.1| env of SIVagm [Simian immunodeficiency virus - a 358 2e-97 gb|AAT41729.1| Env [Simian immunodeficiency virus] 333 1e-89 gb|AAP46095.1| envelope glycoprotein [Simian immunodeficiency vi 331 5e-89 gb|AAC68662.1| Env [Simian immunodeficiency virus] 330 7e-89 gb|AAK64201.1| env protein [Simian immunodeficiency virus 17E-Cl 329 2e-88 gb|AAO67286.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAP46096.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAA91937.1| env protein 328 3e-88 gb|AAV69864.1| envelope glycoprotein [SIV vector pCLN8] 328 3e-88 gb|AAZ52606.1| envelope glycoprotein [Simian immunodeficiency vi 328 3e-88 gb|AAX85828.2| envelope glycoprotein [Simian immunodeficiency vi 328 4e-88 gb|AAK64192.1| truncated envelope glycoprotein [Simian immuno... 328 5e-88 gb|AAA47765.1| envelope polyprotein 328 5e-88 gb|AAA47773.1| envelope polyprotein 328 5e-88 gb|AAX85833.2| envelope glycoprotein [Simian immunodeficiency vi 327 6e-88 gb|AAZ52607.1| envelope glycoprotein [Simian immunodeficiency vi 327 6e-88 gb|AAO67291.1| envelope glycoprotein [Simian immunodeficiency vi 327 7e-88 ALIGNMENTS >gb|AAA99542.1| envelope protein Length=379 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 344/379 (90%), Positives = 346/379 (91%), Gaps = 0/379 (0%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT Sbjct 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHRTSNDS LILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC Sbjct 61 QIWQKHRTSNDSVLILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NWKGAWKEVKEEIV LPKERYRGTND KRIF QRQWGDPETANLWFNCHGEFFYCK Sbjct 121 HFQGNWKGAWKEVKEEIVKLPKERYRGTNDTKRIFLQRQWGDPETANLWFNCHGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVINDWYTISKK 240 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TY+PPREGHLECTSTVTGMTVELNYI +NRTNVTLSPQIESIWAAELDRYKLVEITPIGF Sbjct 241 TYSPPREGHLECTSTVTGMTVELNYINQNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 301 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 360 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 361 LAAVEAQQQMLKLTIWGVK 379 >gb|AAA99544.1| envelope protein Length=375 Score = 635 bits (1638), Expect = 1e-180, Method: Composition-based stats. Identities = 312/379 (82%), Positives = 327/379 (86%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCND DYDGFK NCSNVSVVHCT LMNTTVTTGLLLNGSYSENRT Sbjct 1 ELRLRYCAPAGFALLKCNDYDYDGFKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYSENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR SNDS LI +NKHYNLT+TCKRPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWQKHRVSNDSVLIQINKHYNLTITCKRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW GAWKE+K+EIV LPK+RYRGTND ++I+ RQWGDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWHGAWKEIKQEIVKLPKDRYRGTNDTEQIYLTRQWGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T +ADHN+C N+ TK+G RAPGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNKTWNADHNQCDNS--TKTG--RAPGPCVQRTYVACHIRSVINDWYTISKK 236 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNYI NRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 237 TYAPPREGHLQCTSTVTGMTVELNYINDNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 296 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKR+PFV VQSQHLLAGILQQQKNL Sbjct 297 APTEVRRYTGGHERQKRIPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 356 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 357 LAAVEAQQQMLKLTIWGVK 375 >sp|P27977|ENV_SIVVG Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA91919.1| env polyprotein [Simian immunodeficiency virus] Length=877 Score = 619 bits (1595), Expect = 2e-175, Method: Composition-based stats. Identities = 306/379 (80%), Positives = 323/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKCND DY GFKTNCSNVSVVHCTNL+NTTVTTGLLLNGSYSENRT Sbjct 231 ELRLRYCAPAGFALLKCNDYDYAGFKTNCSNVSVVHCTNLINTTVTTGLLLNGSYSENRT 290 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR SNDS L+L NKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQ+YN RLRQAWC Sbjct 291 QIWQKHRVSNDSVLVLFNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQRYNTRLRQAWC 350 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAWKEVK EIV LPK+RY+GTND + I+ QR +GDPE ANLWFNC GEFFYCK Sbjct 351 HFQGNWRGAWKEVKNEIVKLPKDRYQGTNDTEEIYLQRLFGDPEAANLWFNCQGEFFYCK 410 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN TVD DHN C +GTK G +APGPC QRTYVACHIRSVI T+S+K Sbjct 411 MDWFLNYLNNRTVDPDHNPC---NGTK-GKGKAPGPCAQRTYVACHIRSVINDWYTLSRK 466 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGM+VELNY KNRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 467 TYAPPREGHLQCTSTVTGMSVELNYNSKNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 526 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGH+R KRVPFV VQSQHLLAGILQQQKNL Sbjct 527 APTEVRRYTGGHDRTKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 586 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 587 LAAVEAQQQMLKLTIWGVK 605 >pir||S46345 env polyprotein - simian immunodeficiency virus SIVagm (isolate VER-2) (fragment) gb|AAA21503.1| envelope protein Length=375 Score = 617 bits (1590), Expect = 5e-175, Method: Composition-based stats. Identities = 299/379 (78%), Positives = 324/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDHDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIW+KH SNDS +IL+NK +NLTVTC+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWRKHGVSNDSVIILINKAFNLTVTCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+E+++EI LP +YRGTND ++IF QRQ+GDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWRGAWEEIRQEITKLPPHKYRGTNDTEKIFLQRQFGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHN C +G+++ + RAPGPC QRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLTVDADHNSC---NGSRT-SPRAPGPCAQRTYVACHIRSVINDWYTISKK 236 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY +NRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 237 TYAPPREGHLQCTSTVTGMTVELNYNSRNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 296 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 297 APTDVRRYTGGHERQKRVPFVQGFLGFLGAAGTAMGATATALTVQSQHLLAGILQQQKNL 356 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 357 LAAVEAQQQMLKLTIWGVK 375 >dbj|BAF32565.1| env polyprotein [Simian immunodeficiency virus] Length=863 Score = 610 bits (1574), Expect = 3e-173, Method: Composition-based stats. Identities = 299/379 (78%), Positives = 323/379 (85%), Gaps = 5/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 +LRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 224 QLRLRYCAPAGYALLKCNDEDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 283 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +N++ LIL NKHYNL+VTC+RPGNKTVLPVTIMAGLVFHSQKYN++LRQAWC Sbjct 284 QIWQKHRVNNNTVLILFNKHYNLSVTCRRPGNKTVLPVTIMAGLVFHSQKYNMKLRQAWC 343 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+EVK++IV LPK+RY+GTN+ + I+ QRQWGDPE +NLWFNC GEFFYCK Sbjct 344 HFEGNWRGAWREVKQKIVELPKDRYKGTNNTEHIYLQRQWGDPEASNLWFNCQGEFFYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T DADHN C S K G+ APGPCVQRTYVACHIRSVI T+SKK Sbjct 404 MDWFLNYLNNKTWDADHNFC---SSKKKGH--APGPCVQRTYVACHIRSVINDWYTLSKK 458 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+C STVTGMTVELNY KNRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 459 TYAPPREGHLQCRSTVTGMTVELNYNSKNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 518 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 519 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 578 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 579 LAAVEAQQQMLKLTIWGVK 597 >sp|P27757|ENV_SIVV1 Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA91911.1| env polyprotein Length=768 Score = 609 bits (1571), Expect = 8e-173, Method: Composition-based stats. Identities = 313/379 (82%), Positives = 323/379 (85%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY GFK CSNVSVVHCT LMNTTVTTGLLLNGSYSENRT Sbjct 226 ELRLRYCAPAGYALLKCNDWDYAGFKPECSNVSVVHCTTLMNTTVTTGLLLNGSYSENRT 285 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKH SNDS LILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 286 QIWQKHGVSNDSVLILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 345 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NWKGAWKEV+EEIV LPKERY+GTND +IF QRQ+GDPE ANLWFNC GEFFYCK Sbjct 346 HFQGNWKGAWKEVQEEIVKLPKERYQGTNDTNKIFLQRQFGDPEAANLWFNCQGEFFYCK 405 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNLTVDADHN CKN +G R+PGPCVQRTYVACHIRSVI TISKK Sbjct 406 MDWFLNYLNNLTVDADHNHCKNN----AGKGRSPGPCVQRTYVACHIRSVINDWYTISKK 461 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY +NRTNVTLSPQIE+IWAAEL RYKLVEITPIGF Sbjct 462 TYAPPREGHLQCTSTVTGMTVELNYNNQNRTNVTLSPQIETIWAAELGRYKLVEITPIGF 521 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGG ERQKRVPFV VQSQHLLAGILQQQKNL Sbjct 522 APTEVRRYTGGQERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 581 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAV AQQQMLKLTIWGVK Sbjct 582 LAAVGAQQQMLKLTIWGVK 600 >gb|AAC99812.1| V2-gp41 junction [Simian immunodeficiency virus] Length=371 Score = 608 bits (1567), Expect = 2e-172, Method: Composition-based stats. Identities = 298/379 (78%), Positives = 316/379 (83%), Gaps = 8/379 (2%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTV+TGLLLNGSY+ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDYDYNGYKQNCSNVSVVHCTGLMNTTVSTGLLLNGSYAENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 QIWQKHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAWKEV+++IV LPK+RYRGTN ++IF QRQWGDPE ANLWFNC GEFFYCK Sbjct 121 HFQGNWRGAWKEVRQKIVELPKDRYRGTNQTEQIFLQRQWGDPEAANLWFNCQGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNNL+VDADHN C S R PGPCVQRTYVACHIRSVI TISKK Sbjct 181 MDWFLNYLNNLSVDADHNPCPKKS-------RQPGPCVQRTYVACHIRSVIDDWYTISKK 233 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAAEL RYKLVEITPIGF Sbjct 234 TYAPPREGHLQCTSTVTGMTVELNYNSDNRTNVTLSPQIEGIWAAELGRYKLVEITPIGF 293 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRY G RQKRVPFV VQSQHLLAGILQQQKNL Sbjct 294 APTDVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 352 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQMLKLTIWGVK Sbjct 353 LAAVEQQQQMLKLTIWGVK 371 >gb|AAA64263.1| envelope Length=877 Score = 605 bits (1560), Expect = 2e-171, Method: Composition-based stats. Identities = 298/379 (78%), Positives = 319/379 (84%), Gaps = 4/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAGFALLKC+D DY+G+K NCSNVSVVHCT LMNTTV+TGLLLNGSYSENRT Sbjct 231 ELRLRYCAPAGFALLKCHDHDYNGYKQNCSNVSVVHCTGLMNTTVSTGLLLNGSYSENRT 290 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +NDS ++L NK+YNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 291 QIWQKHRVNNDSVIVLFNKYYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWC 350 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF W+ AWKEVKEEI+ LPK+RYRGTND ++I+ QRQ+GDPE ANLWFNC GEFFYCK Sbjct 351 HFQGRWREAWKEVKEEIIKLPKDRYRGTNDTEKIYLQRQFGDPEAANLWFNCQGEFFYCK 410 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN +VDA+HN+C N TK GN APGPCVQRTYVACHIRSVI TISKK Sbjct 411 MDWFLNYLNNQSVDANHNQCSNE--TKKGN--APGPCVQRTYVACHIRSVINDWYTISKK 466 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLECTSTVTGMTVELNY RTNVTLSPQIE IWAAEL RYKLVEITPIGF Sbjct 467 VYAPPREGHLECTSTVTGMTVELNYNNNYRTNVTLSPQIEGIWAAELGRYKLVEITPIGF 526 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT VRRYTGG +R KRVPFV VQSQHLLAGI+QQQKNL Sbjct 527 APTNVRRYTGGQDRSKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGIMQQQKNL 586 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 587 LAAVEAQQQMLKLTIWGVK 605 >sp|P05886|ENV_SIVVT Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] emb|CAA30663.2| env polyprotein [Simian immunodeficiency virus] Length=865 Score = 602 bits (1551), Expect = 2e-170, Method: Composition-based stats. Identities = 296/379 (78%), Positives = 321/379 (84%), Gaps = 5/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 +LRLRYCAPAG+ALLKCND DY+G+K NCSNVSVVHCT LMNTTVTTGLLLNGSY ENRT Sbjct 225 QLRLRYCAPAGYALLKCNDEDYNGYKQNCSNVSVVHCTGLMNTTVTTGLLLNGSYHENRT 284 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 QIWQKHR +N++ LIL NKHYNL+VTC+RPGNKTVLPVTIMAGLVFHSQKYN++LRQAWC Sbjct 285 QIWQKHRVNNNTVLILFNKHYNLSVTCRRPGNKTVLPVTIMAGLVFHSQKYNMKLRQAWC 344 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF NW+GAW+EVK++IV LPK+RY+GTN+ + I+ QRQWGDPE +NLWFNC GEFFYCK Sbjct 345 HFEGNWRGAWREVKQKIVELPKDRYKGTNNTEHIYLQRQWGDPEASNLWFNCQGEFFYCK 404 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLNYLNN T DA HN C S K G+ APGPCVQRTYVA HIRSVI T+SKK Sbjct 405 MDWFLNYLNNKTWDAYHNFC---SSKKKGH--APGPCVQRTYVAYHIRSVINDSYTLSKK 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHL+C STVTGMTVELNY KNRTNVTLSPQIESIWAAEL RYKLVEITPIGF Sbjct 460 TYAPPREGHLQCRSTVTGMTVELNYNSKNRTNVTLSPQIESIWAAELGRYKLVEITPIGF 519 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APTEVRRYTGGHERQKRVPFV VQS+HLLAGILQQQKNL Sbjct 520 APTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAASSLTVQSRHLLAGILQQQKNL 579 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 580 LAAVEAQQQMLKLTIWGVK 598 >pir||S46344 env polyprotein - simian immunodeficiency virus SIVagm (isolate VER-1) (fragment) gb|AAA21502.1| envelope protein Length=372 Score = 588 bits (1516), Expect = 2e-166, Method: Composition-based stats. Identities = 284/379 (74%), Positives = 314/379 (82%), Gaps = 7/379 (1%) Query 1 ELRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRT 60 ELRLRYCAPAG+ALLKCND +Y GF C NVSVVHCT LMNTTV+TGLLLNGSY+ENRT Sbjct 1 ELRLRYCAPAGYALLKCNDRNYTGFAPRCRNVSVVHCTGLMNTTVSTGLLLNGSYTENRT 60 Query 61 QIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWC 120 +IWQKH+ SN+S +I +NKHYNLT+ C RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 61 EIWQKHKVSNNSVIIRINKHYNLTIRCVRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWC 120 Query 121 HFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCK 180 HF +W+GAW+E+K++IV LPKERY+GTND K+IF QRQWGDPE +NLWFNCHGEFFYCK Sbjct 121 HFKGDWRGAWREIKQKIVELPKERYQGTNDTKQIFLQRQWGDPEASNLWFNCHGEFFYCK 180 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDW LNY+NNLTVDA+HN C +T G + PGPCVQRTYV CHIRSVI +++K Sbjct 181 MDWMLNYINNLTVDANHNNCNSTQGKR------PGPCVQRTYVGCHIRSVINDWYKLARK 234 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 TYAPPREGHLECTSTVTGM VELNYI KNRTNVTLSPQIE+IWA+EL RYKLVEITPIGF Sbjct 235 TYAPPREGHLECTSTVTGMAVELNYIHKNRTNVTLSPQIEAIWASELGRYKLVEITPIGF 294 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT VRRYTG R+KRVPFV VQSQHLLAGILQQQKNL Sbjct 295 APTPVRRYTGP-SREKRVPFVLGFLGFLGAAGTAMGAAATALTVQSQHLLAGILQQQKNL 353 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVEAQQQMLKLTIWGVK Sbjct 354 LAAVEAQQQMLKLTIWGVK 372 >pir||S46352 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-1) gb|AAA21510.1| envelope glycoprotein [Simian immunodeficiency virus - agm.sab-1] Length=732 Score = 509 bits (1311), Expect = 1e-142, Method: Composition-based stats. Identities = 257/378 (67%), Positives = 284/378 (75%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTTV+TG+ +NGSY NRT+ Sbjct 223 FRLRYCAPAGYALLRCADTDYSGHKA-CRNVTVSACTRLINTTVSTGIGINGSYVANRTE 281 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ SNDS +I LN+++NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWC Sbjct 282 IWQKNGNSNDSVIIRLNRYFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCW 341 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F NW+GAWKEVKE IV LP ++Y GTND +IF QRQWGDPE+ +FNC GEFFYCKM Sbjct 342 FGGNWRGAWKEVKETIVRLPPKKYSGTNDTNKIFLQRQWGDPESEFFFFNCQGEFFYCKM 401 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C K PC QRTYV CHIR V+ T+SKKT Sbjct 402 DWFLNYLNNKSVDPDHNNCA---------KNNTKPCWQRTYVPCHIRQVVNDWYTLSKKT 452 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQIESIWA EL YKLVEI PIGFA Sbjct 453 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIESIWANELGDYKLVEIKPIGFA 512 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PT+VRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 513 PTKVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 571 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 572 AAVEQQQQMLKLTIWGVK 589 >pir||S46338 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-3) (fragment) gb|AAA21496.1| envelope protein Length=368 Score = 508 bits (1309), Expect = 2e-142, Method: Composition-based stats. Identities = 257/378 (67%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTTV+TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCADTDYSGHK-KCKNVTVSACTRLINTTVSTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ SNDS +I LN+H+NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWC Sbjct 61 IWQKNGNSNDSVIIRLNRHFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F NW+GAW+EVKE IV LP +RY+GT D +IF QRQWGDPE +FNC GEFFYCKM Sbjct 121 FGGNWRGAWQEVKETIVALPPDRYQGTKDTNKIFLQRQWGDPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C TS K C QR Y CHIR V+ T+SKKT Sbjct 181 DWFLNYLNNQSVDPDHNPCNKTSDKK---------CWQRNYAPCHIRQVVNDWYTLSKKT 231 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQIESIWA EL YKLVEI PIGFA Sbjct 232 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIESIWANELGDYKLVEIKPIGFA 291 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 292 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 350 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 351 AAVEQQQQMLKLTIWGVK 368 >pir||S46341 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN17) (fragment) gb|AAA21499.1| envelope protein Length=371 Score = 503 bits (1295), Expect = 8e-141, Method: Composition-based stats. Identities = 251/383 (65%), Positives = 285/383 (74%), Gaps = 18/383 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGFGI-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 +WQKH SNDS +I LNK YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWCH Sbjct 61 VWQKHGVSNDSVIIKLNKFYNLTIKCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F WK AWKEV+E IV LPKE+YRGTND K+I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FQGKWKEAWKEVRETIVKLPKEKYRGTNDTKKIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTV-----DADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLET 236 DWF+NYLNN + D + N+CK+ P C +R+YV CHIRSV+ T Sbjct 181 DWFVNYLNNDSARRRKEDVEGNDCKD-----------PRKCFKRSYVPCHIRSVVNDWYT 229 Query 237 ISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEIT 296 +SKKTYAPPREGHLECTSTVT M V L+Y+ KN TNVTL+ +E+IWA EL RYK++EI Sbjct 230 LSKKTYAPPREGHLECTSTVTSMMVSLDYVNKNMTNVTLTANLENIWAYELGRYKIIEIK 289 Query 297 PIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQ 356 PIGFAPT+VRRY G R+KRVPFV VQSQ LLAGILQQ Sbjct 290 PIGFAPTDVRRYVGP-TREKRVPFVLGSLGFLGRAGAAMGATATELTVQSQQLLAGILQQ 348 Query 357 QKNLLAAVEAQQQMLKLTIWGVK 379 QKNLLAAVE QQQMLKLTIWGVK Sbjct 349 QKNLLAAVEQQQQMLKLTIWGVK 371 >gb|AAC33802.1| envelope glycoprotein [Simian immunodeficiency virus] Length=871 Score = 501 bits (1291), Expect = 2e-140, Method: Composition-based stats. Identities = 254/378 (67%), Positives = 284/378 (75%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K +CSNVSV CT L+NTT++TG+ +NGSY NRT+ Sbjct 226 FRLRYCAPAGYALLRCRDTDYSGHK-DCSNVSVSACTRLINTTISTGIGINGSYVANRTE 284 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SND+ +I LN+HYNLT+ C+RPGNKTVLPVTIMAGLVFHSQK N +L+QAWC Sbjct 285 IWQENGNSNDTVIIRLNRHYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKDNTKLKQAWCW 344 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+ AW+EVKE IV LPK+R GTND RIF +RQWGDPE +FNC GEFFYCKM Sbjct 345 FGGRWRSAWREVKETIVELPKDRDSGTNDTSRIFLRRQWGDPEAEFFFFNCQGEFFYCKM 404 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLN+LNN +VD DHN C TK +K+ C QRTYV CHIR V+ T+SKKT Sbjct 405 DWFLNFLNNQSVDPDHNNC-----TKQNDKK----CWQRTYVPCHIRQVVNDWYTLSKKT 455 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 456 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 515 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 516 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 574 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 575 AAVEQQQQMLKLTIWGVK 592 >pir||S46343 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN49) (fragment) gb|AAA21501.1| envelope protein Length=379 Score = 500 bits (1287), Expect = 7e-140, Method: Composition-based stats. Identities = 250/384 (65%), Positives = 290/384 (75%), Gaps = 12/384 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y G+ C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGYGI-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKHR +NDS +I LNK+Y L VTC+RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWCH Sbjct 61 IWQKHRINNDSVIIKLNKYYKLGVTCRRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LP++RY GTN+ +I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FHGDWKGAWKEVRETIVKLPRDRYSGTNNTNQIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLT-----VDADHNECKN-TSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLE 235 DWF+N+LNN + D + N C N T G +G+++ C++RTYV CHIRSV+ Sbjct 181 DWFVNWLNNESAGGNYTDVEGNPCSNSTKGGMTGSRK----CLKRTYVGCHIRSVVNDWY 236 Query 236 TISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEI 295 ++SKKTYAPPREGHLECTSTVT M V L+Y KN TNVTL+ +E+IWA EL RYKL+EI Sbjct 237 SLSKKTYAPPREGHLECTSTVTSMMVSLDYNSKNMTNVTLTANLENIWAYELGRYKLIEI 296 Query 296 TPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQ 355 PIGFAPTEVRRY G R+KRVPFV VQSQ LLAGILQ Sbjct 297 KPIGFAPTEVRRYVGP-TREKRVPFVLGFLGFLGRAGAAMGATETELTVQSQQLLAGILQ 355 Query 356 QQKNLLAAVEAQQQMLKLTIWGVK 379 QQKNLLAAVE QQQMLKLTIWGVK Sbjct 356 QQKNLLAAVEQQQQMLKLTIWGVK 379 >gb|AAC33803.1| envelope glycoprotein [Simian immunodeficiency virus] Length=871 Score = 499 bits (1286), Expect = 1e-139, Method: Composition-based stats. Identities = 251/378 (66%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K +CSNVSV CT L+NTT++TG+ +NGSY NRT+ Sbjct 226 FRLRYCAPAGYALLRCRDTDYSGHK-DCSNVSVSACTRLINTTISTGIGINGSYVANRTE 284 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SND+ +I LN+HYNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +L+QAWC Sbjct 285 IWQENGNSNDTVIIRLNRHYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLKQAWCW 344 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W+ AW+ V+E IV LPK+RY GTND +IF RQWGDPET +FNC GEFFYCKM Sbjct 345 FGGHWRSAWQGVEETIVELPKDRYSGTNDTSKIFLHRQWGDPETEFFFFNCQGEFFYCKM 404 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLN LNN +VD DHN C + K C QRTYV CHIR V+ T+SKKT Sbjct 405 DWFLNGLNNQSVDPDHNNCTKQNDNK---------CWQRTYVPCHIRQVVNDWYTLSKKT 455 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 456 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 515 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQ+RVPFV VQSQ LLAGILQQQKNLL Sbjct 516 PTEVRRYTGP-ERQERVPFVLGFLGFLGAAGATMGAAATTLTVQSQQLLAGILQQQKNLL 574 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 575 AAVEQQQQMLKLTIWGVK 592 >pir||S46337 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-2) (fragment) gb|AAA21495.1| envelope protein Length=369 Score = 498 bits (1281), Expect = 3e-139, Method: Composition-based stats. Identities = 251/378 (66%), Positives = 282/378 (74%), Gaps = 10/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D DY G K C NV+V CT L+NTT++TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCADTDYSGHKA-CKNVTVSACTRLINTTISTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK+ +N + +I LN+H+NLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWC Sbjct 61 IWQKNGNANHTVIIRLNRHFNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W+GAW+EVKE+IV LP +RY GTND +IF QRQWGDPE +FNC GEFFYCKM Sbjct 121 FGGDWRGAWQEVKEKIVALPPDRYSGTNDTNKIFLQRQWGDPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN C GN + C QRTYV CHIR ++ T+SKKT Sbjct 181 DWFLNYLNNQSVDPDHNPC-------GGNDKNNRKCWQRTYVPCHIRQIVNDWYTLSKKT 233 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VEL Y KNRTNVTLSP IESIWA EL YKLVEI PIGFA Sbjct 234 YAPPREGHLECNSTATALYVELLYNSKNRTNVTLSPHIESIWANELGDYKLVEIKPIGFA 293 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 294 PTEVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 352 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 353 AAVE-QQQMLKLTIWGVK 369 >pir||S46339 env polyprotein - simian immunodeficiency virus SIVagm (isolate SAB-4) (fragment) gb|AAA21497.1| envelope protein Length=368 Score = 493 bits (1269), Expect = 8e-138, Method: Composition-based stats. Identities = 254/378 (67%), Positives = 282/378 (74%), Gaps = 11/378 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D+DY G K NC NVSV CT L+NTTV+TG+ +NGSY NRT+ Sbjct 2 FRLRYCAPAGYALLRCRDSDYRGHK-NCQNVSVSACTRLINTTVSTGIGINGSYVANRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ++ SN++A+I LN++YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN RLRQAWC Sbjct 61 IWQENGNSNNTAIIRLNRYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLRQAWCW 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+GAW+E KEEIV L ERY GT + +IF QRQWG PE +FNC GEFFYCKM Sbjct 121 FGGKWRGAWQEAKEEIVKLSPERYSGTKNTSQIFLQRQWGGPEAEFFFFNCQGEFFYCKM 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD +HN C T +KR C QRTYV CHIR V+ T+SKKT Sbjct 181 DWFLNYLNNQSVDPNHNTC-----TPKSDKR----CWQRTYVPCHIRQVVNDWYTLSKKT 231 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLEC ST T + VELNY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 232 YAPPREGHLECNSTATALYVELNYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 291 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PT VRRYTG ERQKRVPFV VQSQ LLAGILQQQKNLL Sbjct 292 PTNVRRYTGP-ERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQQQKNLL 350 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 351 AAVEQQQQMLKLTIWGVK 368 >gb|AAC59620.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 492 bits (1266), Expect = 2e-137, Method: Composition-based stats. Identities = 239/285 (83%), Positives = 250/285 (87%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS LIL N+HYNLTVTCKRPGNKT Sbjct 1 VHCTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNRHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQ YNLRLRQAWCHF NWKGAWKEV++E+V LPK+RYRGT RI Sbjct 61 VLPVTIMAGLVFHSQSYNLRLRQAWCHFEGNWKGAWKEVRQELVKLPKDRYRGTKHTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 + QRQ+GDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH T+ + AP Sbjct 121 YLQRQFGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHYYQLPTN-----RQDAP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYKDNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIESIWAAEL RYKLVEITPIGFAPTEVRRYTGGHER KRVP Sbjct 236 LSPQIESIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERTKRVP 280 >gb|AAC99811.1| V2-V5 region [Simian immunodeficiency virus] gb|AAF21586.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21587.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21589.1| envelope glycoprotein [Simian immunodeficiency virus] gb|AAF21591.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 490 bits (1262), Expect = 6e-137, Method: Composition-based stats. Identities = 238/304 (78%), Positives = 255/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59617.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 489 bits (1260), Expect = 1e-136, Method: Composition-based stats. Identities = 238/285 (83%), Positives = 252/285 (88%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSYSENRTQIWQKHR +NDS LIL NK YNLTV C+RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNKWYNLTVRCRRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYN RLRQAWCHF NW+GAWKEV+EE+V LPK+RYRGTN ++I Sbjct 61 VLPVTIMAGLVFHSQKYNTRLRQAWCHFQGNWRGAWKEVREELVKLPKDRYRGTNKTEQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQ+GDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHN+C N ++G RAP Sbjct 121 FLQRQFGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNKCNN---NRTG--RAP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLE STVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLELLSTVTGMTVELNYNSNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE IWAAEL RYKLVEITPIGFAPTE+RRYTGGHERQK VP Sbjct 236 LSPQIEGIWAAELGRYKLVEITPIGFAPTEIRRYTGGHERQKTVP 280 >ref|NP_054372.1| envelope protein [Simian immunodeficiency virus] sp|Q02837|ENV_SIVG1 Envelope glycoprotein gp160 precursor (Env polyprotein) [Contains: Surface protein (SU) (Glycoprotein 120) (gp120); Transmembrane protein (TM) (Glycoprotein 32) (gp32)] gb|AAA47591.1| envelope protein [Simian immunodeficiency virus] gb|AAA91928.1| envelope glycoprotein [Simian immunodeficiency virus] Length=854 Score = 486 bits (1252), Expect = 7e-136, Method: Composition-based stats. Identities = 249/379 (65%), Positives = 281/379 (74%), Gaps = 10/379 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LR+RYCAPAG+ALLKCND DY GF C NVSVVHCT L+NTT+TTG+ LNGS SENRT+ Sbjct 215 LRVRYCAPAGYALLKCNDKDYRGFAPKCKNVSVVHCTRLINTTITTGIGLNGSRSENRTE 274 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQK ND+ +I LNK YNLTV C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWCH Sbjct 275 IWQKGGNDNDTVIIKLNKFYNLTVRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCH 334 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+EE+ K + + I +R WGDPE+AN WFNC GEFFYCKM Sbjct 335 FQGDWKGAWKEVREEV---KKVKNLTEVSIENIHLRRIWGDPESANFWFNCQGEFFYCKM 391 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NYLNN T DA+ T+ T K PGPCVQRTYVACHIR V+ T+SKK Sbjct 392 DWFINYLNNRTEDAE-----GTNRTCDKGKPGPGPCVQRTYVACHIRQVVNDWYTVSKKV 446 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLEC S+VT + V ++Y K+ NVTLSPQ+ SIWA EL YKLVEITPIGF Sbjct 447 YAPPREGHLECNSSVTALYVAIDYNNKSGPINVTLSPQVRSIWAYELGDYKLVEITPIGF 506 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG R+KRVPFV VQS+HLLAGILQQQKNL Sbjct 507 APTDVRRYTGP-TREKRVPFVLGFLGFLGAAGTAMGAAATTLTVQSRHLLAGILQQQKNL 565 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQ+LKLTIWGVK Sbjct 566 LAAVEQQQQLLKLTIWGVK 584 >pir||S46335 env polyprotein - simian immunodeficiency virus SIVagm (isolate GRI-3) (fragment) gb|AAA21493.1| envelope protein Length=371 Score = 486 bits (1250), Expect = 1e-135, Method: Composition-based stats. Identities = 245/379 (64%), Positives = 280/379 (73%), Gaps = 10/379 (2%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LR+RYCAPAG+ALLKCND DY+GF C NVSVVHCT L+NTT+TTG+ LNGS ENRT+ Sbjct 2 LRVRYCAPAGYALLKCNDKDYNGFAPKCKNVSVVHCTRLINTTITTGIGLNGSRVENRTE 61 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SND+ +I LNK YNLTV C+RPGNKT+LPVTIMAG VFHSQKYN +L+QAWCH Sbjct 62 IWQEKGNSNDTVIIKLNKFYNLTVRCRRPGNKTILPVTIMAGRVFHSQKYNTKLKQAWCH 121 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 NW GAWKEV+E+I +E+ + I +RQWGDPE AN WFNCHGEFFYCKM Sbjct 122 SQGNWLGAWKEVREKI---KEEKNLTEVKIENIHLRRQWGDPEAANFWFNCHGEFFYCKM 178 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NYLNN TVDAD C T + PGPC ++TYVACHIR V+ T++KKT Sbjct 179 DWFINYLNNQTVDADGKSC-----TSHKKGQGPGPCAKKTYVACHIRQVVNDWYTLTKKT 233 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 YAPPREGHLEC STVT + VE+NY K+ NVTLS Q+ SIWA EL YKLVEITPIGF Sbjct 234 YAPPREGHLECNSTVTALYVEINYNNKSGPINVTLSSQVRSIWAYELGDYKLVEITPIGF 293 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG R+KRVPFV VQS+HLLAGILQQQKNL Sbjct 294 APTDVRRYTGP-SREKRVPFVLGFLGFLGAAGTAMGAAATALTVQSRHLLAGILQQQKNL 352 Query 361 LAAVEAQQQMLKLTIWGVK 379 L AVE QQQ+LKLTIWGVK Sbjct 353 LVAVEQQQQLLKLTIWGVK 371 >gb|AAC59616.1| envelope glycoprotein [Simian immunodeficiency virus] Length=283 Score = 485 bits (1249), Expect = 2e-135, Method: Composition-based stats. Identities = 234/285 (82%), Positives = 248/285 (87%), Gaps = 2/285 (0%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSY+ENRTQIWQKHR +NDS ++L NK+YNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYAENRTQIWQKHRVNNDSVIVLFNKYYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAG VFHSQKYN RLRQAWCHF NWKGAWKEV+E+IV LPK+RYRGTN RI Sbjct 61 VLPVTIMAGRVFHSQKYNTRLRQAWCHFRGNWKGAWKEVREKIVQLPKDRYRGTNRTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQWGDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVD C N + KS RAP Sbjct 121 FLQRQWGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDRRDKPCNNNNTNKS--SRAP 178 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY +RTNVT Sbjct 179 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNNNDRTNVT 238 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQ+ESIWAAEL RYKLVEITPIGFAPT++RRYTGGHERQKRVP Sbjct 239 LSPQVESIWAAELGRYKLVEITPIGFAPTDIRRYTGGHERQKRVP 283 >gb|AAF21588.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 485 bits (1248), Expect = 2e-135, Method: Composition-based stats. Identities = 236/304 (77%), Positives = 254/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ +NDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKVNNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 HSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 SHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59621.1| envelope glycoprotein [Simian immunodeficiency virus] Length=283 Score = 484 bits (1247), Expect = 3e-135, Method: Composition-based stats. Identities = 234/285 (82%), Positives = 252/285 (88%), Gaps = 2/285 (0%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCTNLMNTTVTTGLLLNGSYSENRT+IWQKH SNDS LILLNKHYNLTVTCKRPGNKT Sbjct 1 VHCTNLMNTTVTTGLLLNGSYSENRTEIWQKHGVSNDSVLILLNKHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 V+PVTIMAGLVFHSQKYNLRLRQA CHF NWKGAWKEVK++IV LPKE+YRGT++ ++I Sbjct 61 VVPVTIMAGLVFHSQKYNLRLRQASCHFQGNWKGAWKEVKQKIVELPKEKYRGTSNTEQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QR +GDPE ANLWFNC GEFFYCKMDWFLNYLNN+ +D D+NEC TK GN AP Sbjct 121 FLQRHFGDPEAANLWFNCQGEFFYCKMDWFLNYLNNVHLDPDYNECHLNDTTKKGN--AP 178 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSV+ T+SK+ APPREGHL+CTSTVTGM VELNY NRTNVT Sbjct 179 GPCVQRTYVACHIRSVVNDWYTVSKRNNAPPREGHLQCTSTVTGMAVELNYNSDNRTNVT 238 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE+IWAAEL RYKLVEITPIGFAPTEVRRYTGGHERQKRVP Sbjct 239 LSPQIENIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 283 >pir||S46340 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN-1) (fragment) gb|AAA21498.1| envelope protein Length=373 Score = 484 bits (1247), Expect = 3e-135, Method: Composition-based stats. Identities = 240/378 (63%), Positives = 283/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ +NGS +ENRT+ Sbjct 2 LRLRYCAPAGFAILKCKDTNYTGFGV-CRNVSVVSCTGLMNTTVSSAFGINGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SN+S +I LNKHY L + C+RPGNKTVLPVTIMAGLVFHSQ+YN +LRQAWCH Sbjct 61 IWQKHGVSNNSVIIKLNKHYKLKIVCRRPGNKTVLPVTIMAGLVFHSQQYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAW+EV++ IV LPKE+YRGTN+ ++I+ RQWGDPE AN+W NC GEFFYC Sbjct 121 FQGDWKGAWREVRKTIVELPKEKYRGTNNTRQIWLSRQWGDPEAANIWLNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+N+LNN + + + + + T +KR C +RTYV CHIRS++ T+SKKT Sbjct 181 DWFVNWLNNESNSGRNVDVEGNNCTTGKDKR----CYKRTYVPCHIRSIVNDWYTLSKKT 236 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT M V L+Y K RTNVTL+ +E+IWA EL RYKL+EI PIGFA Sbjct 237 YAPPREGHLECTSTVTSMMVSLDYNSKERTNVTLTANLENIWAYELGRYKLIEIEPIGFA 296 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTE+RRY G R+KRVPFV VQSQ LLAG+LQQQKNLL Sbjct 297 PTEIRRYVGP-TREKRVPFVLGFLGFLGAAGAAMGATATALTVQSQQLLAGMLQQQKNLL 355 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 356 AAVEQQQQMLKLTIWGVK 373 >pir||S46336 env polyprotein - simian immunodeficiency virus SIVagm (isolate GRI-2) (fragment) gb|AAA21494.1| envelope protein Length=367 Score = 484 bits (1246), Expect = 4e-135, Method: Composition-based stats. Identities = 245/379 (64%), Positives = 284/379 (74%), Gaps = 14/379 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFALL+C D +Y+GF +C NV+V HCT L+NTTV+TG+ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFALLRCLDKNYNGFAPSCKNVTVTHCTRLINTTVSTGIGLNGSRAENRTE 61 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SN++ +I LNK YNLTV C+RPGNKTVLPVTIMAGLVFHSQKYN RL+QAWCH Sbjct 62 IWQEKGNSNNTVIIKLNKFYNLTVRCRRPGNKTVLPVTIMAGLVFHSQKYNTRLKQAWCH 121 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +W GAWKEVK+E+ K + T+D K +RQWGDPE AN WF+C GEFFYCKM Sbjct 122 FQGDWHGAWKEVKQEV---KKAKNLTTDDIK---LRRQWGDPEAANFWFSCQGEFFYCKM 175 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+NY+NN TVDAD N+C G PGPCVQRTYVACHIR V+ T++KKT Sbjct 176 DWFINYINNETVDADGNKCNKPKGP------GPGPCVQRTYVACHIRQVVNDWYTLTKKT 229 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKN-RTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG LEC S+VT + VE+NY ++ NVTLSPQI SIWA EL YKLVEITPIGF Sbjct 230 YRPPREGQLECNSSVTALYVEINYNNESGPINVTLSPQIRSIWAYELGDYKLVEITPIGF 289 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT+VRRYTG +QKRVPFV VQS+HLLAGILQQQ+NL Sbjct 290 APTDVRRYTGP-TKQKRVPFVLGFLGFLGAAGTAMGAAATALTVQSRHLLAGILQQQRNL 348 Query 361 LAAVEAQQQMLKLTIWGVK 379 LAAVE QQQ+LKLTIWGVK Sbjct 349 LAAVEQQQQLLKLTIWGVK 367 >gb|AAC57057.1| envelope glycoprotein [Simian immunodeficiency virus - agm.tan-1] Length=879 Score = 484 bits (1245), Expect = 5e-135, Method: Composition-based stats. Identities = 241/378 (63%), Positives = 283/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFA+LKC D +Y GF C NVSVV CT LMNTTV++ +NGS +ENRT+ Sbjct 224 LRLRYCAPAGFAILKCKDTNYTGFGV-CRNVSVVSCTGLMNTTVSSAFGINGSQAENRTE 282 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SN+S +I LNKHY L + C+RPGNKTVLPVTIMAGLVFHSQ+YN +LRQAWCH Sbjct 283 IWQKHGVSNNSVIIKLNKHYKLKIVCRRPGNKTVLPVTIMAGLVFHSQQYNTKLRQAWCH 342 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAW+EV++ IV LPKE+YRGTN+ ++I+ RQWGDPE AN+W NC GEFFYC Sbjct 343 FQGDWKGAWREVRKTIVELPKEKYRGTNNTRQIWLSRQWGDPEAANIWLNCQGEFFYCTP 402 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWF+N+LNN + + + + + T +KR C +RTYV CHIRS++ T+SKKT Sbjct 403 DWFVNWLNNESNSGRNVDVEGNNCTTGKDKR----CYKRTYVPCHIRSIVNDWYTLSKKT 458 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT M V L+Y K RTNVTL+ +E+IWA EL RYKL+EI PIGFA Sbjct 459 YAPPREGHLECTSTVTSMMVSLDYNSKERTNVTLTANLENIWAYELGRYKLIEIEPIGFA 518 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTE+RRY G R+KRVPFV VQSQ LLAGILQQQKNLL Sbjct 519 PTEIRRYVGP-TREKRVPFVLGFLGFLGAAGAAMGATATALTVQSQQLLAGILQQQKNLL 577 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 578 AAVEQQQQMLKLTIWGVK 595 >gb|AAF21595.1| envelope glycoprotein [Simian immunodeficiency virus] Length=301 Score = 483 bits (1244), Expect = 7e-135, Method: Composition-based stats. Identities = 235/304 (77%), Positives = 253/304 (83%), Gaps = 3/304 (0%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I +KHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFSKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN + RQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKSRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN+C NT+G K GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNKCDNTTGRK-GN--APGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 178 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 297 Query 346 SQHL 349 SQHL Sbjct 298 SQHL 301 >gb|AAC59618.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 481 bits (1239), Expect = 3e-134, Method: Composition-based stats. Identities = 236/285 (82%), Positives = 250/285 (87%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSYSENRTQIWQKHR +NDS +IL NKHYNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYSENRTQIWQKHRVNNDSVIILFNKHYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYN++LRQAWCHF NW+GAWKEV+E+IV LPKERYRGTN+ K+I Sbjct 61 VLPVTIMAGLVFHSQKYNMKLRQAWCHFRGNWRGAWKEVREKIVKLPKERYRGTNNTKQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQ+GDPE ANLWFN HGEFFYCKMDWFLNYLNNLTVD N ++ K GN AP Sbjct 121 FLQRQFGDPEAANLWFNRHGEFFYCKMDWFLNYLNNLTVDPIINSVQH---KKKGN--AP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRT+VACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY NRTNVT Sbjct 176 GPCVQRTHVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNSNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIE IWAAEL RYKLVEITPIGFAPTEVRRYTGGHERQKRVP Sbjct 236 LSPQIEGIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 280 >gb|AAF21592.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 481 bits (1237), Expect = 4e-134, Method: Composition-based stats. Identities = 234/304 (76%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD DHN C NT T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNNCDNT--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY K RT VTLSPQIESIWAA Sbjct 177 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYYNKIRTYVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITP GFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 237 ELGRYKLVEITPSGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAPGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21590.1| envelope glycoprotein [Simian immunodeficiency virus] Length=299 Score = 481 bits (1237), Expect = 4e-134, Method: Composition-based stats. Identities = 234/304 (76%), Positives = 251/304 (82%), Gaps = 5/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND ++IF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTEKIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYC+MDWFLNYLNNLTVD DHN C + + GN APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCRMDWFLNYLNNLTVDPDHNNC---TTRRKGN--APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I TISK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 176 HIRSIINDWYTISKLTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 295 Query 346 SQHL 349 SQHL Sbjct 296 SQHL 299 >pir||S46342 env polyprotein - simian immunodeficiency virus SIVagm (isolate TAN40) (fragment) gb|AAA21500.1| envelope protein Length=373 Score = 480 bits (1236), Expect = 6e-134, Method: Composition-based stats. Identities = 244/378 (64%), Positives = 280/378 (74%), Gaps = 6/378 (1%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPAGFALLKC D +Y GF C+NVSVV CT LMNTT+++ LNGS +ENRT+ Sbjct 2 LRLRYCAPAGFALLKCRDTNYAGFGI-CNNVSVVSCTGLMNTTISSAFGLNGSQAENRTE 60 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SNDS +I LNKHY L + C RPGNKTVLPVTIMAGLVFHSQKYN +LRQAWCH Sbjct 61 IWQKHGNSNDSVIIKLNKHYQLKIKCIRPGNKTVLPVTIMAGLVFHSQKYNTKLRQAWCH 120 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LPKE+Y+GT + I+ +RQWGDPE AN+WFNC GEFFYC Sbjct 121 FQGDWKGAWKEVRETIVKLPKEKYQGTKNTTEIWLRRQWGDPEAANIWFNCQGEFFYCTP 180 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DW +N+LNN ++D + N G ++ C +RTYVACHIRSV+ T+SKKT Sbjct 181 DWMVNWLNN---ESDSGKSVNVEGNTCTPEK-DRLCKKRTYVACHIRSVVNDWYTLSKKT 236 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREGHLECTSTVT + L+Y KN TNVTL+ IE+++A EL RYKL+EI PIGFA Sbjct 237 YAPPREGHLECTSTVTSIIASLDYNNKNMTNVTLTANIENLYAYELGRYKLIEIKPIGFA 296 Query 302 PTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNLL 361 PTEVRRY G R+KRVPFV VQSQ LLAGILQQQKNLL Sbjct 297 PTEVRRYVGP-TREKRVPFVLGFLGFLGRAGAAMGATATALTVQSQQLLAGILQQQKNLL 355 Query 362 AAVEAQQQMLKLTIWGVK 379 AAVE QQQMLKLTIWGVK Sbjct 356 AAVEQQQQMLKLTIWGVK 373 >gb|AAC59619.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 479 bits (1232), Expect = 2e-133, Method: Composition-based stats. Identities = 233/285 (81%), Positives = 247/285 (86%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS LIL NKHYNLTVTCKRPGNKT Sbjct 1 VHCTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLILFNKHYNLTVTCKRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAGLVFHSQKYNLRLRQAWCHF NWKGAWKEV++E+V LPK+RYRGTN+ RI Sbjct 61 VLPVTIMAGLVFHSQKYNLRLRQAWCHFQGNWKGAWKEVRQELVKLPKDRYRGTNNTDRI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 + QRQ+GDPE +NLWFNC GEFFY +MDWF +Y+NNLTVDADHN C +G K G R P Sbjct 121 YLQRQFGDPEASNLWFNCQGEFFYSRMDWFCHYINNLTVDADHNPC---NGQKKG--RVP 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQ TYV HIRSVI TISKK YAPPREG L+C STVTGMTVELNY NRTNVT Sbjct 176 GPCVQSTYVVYHIRSVINDWYTISKKMYAPPREGTLQCMSTVTGMTVELNYRDNNRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQIESIWAAEL RYKLVEITPIGFAPTEVRRYTGGHER KRVP Sbjct 236 LSPQIESIWAAELGRYKLVEITPIGFAPTEVRRYTGGHERTKRVP 280 >gb|AAF21593.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 478 bits (1229), Expect = 4e-133, Method: Composition-based stats. Identities = 232/304 (76%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFFNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD+DHN C N T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDSDHNNCDNK--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I T SK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 177 HIRSIINDWYTASKFTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKR+P V VQ Sbjct 237 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRIPVVLGFLGFLAAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21594.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 478 bits (1229), Expect = 4e-133, Method: Composition-based stats. Identities = 232/304 (76%), Positives = 250/304 (82%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY ENRTQIWQKH+ SNDS +I NKHYNLTVTCKRPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYHENRTQIWQKHKISNDSVIIFSNKHYNLTVTCKRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVK++IV LPK+RY+GTND +RIF QRQWGDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKQKIVELPKDRYKGTNDTERIFLQRQWGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLWFNC GEFFYC+MDWFLNYLNNLTVD+DHN C N T+ GN APGPCVQRTYVAC Sbjct 121 ENLWFNCQGEFFYCRMDWFLNYLNNLTVDSDHNNCDNK--TRKGN--APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRS+I T+SK TYAPPREGHL+CTSTVTGMTVELNY KNRTNVTLSPQIESIWAA Sbjct 177 HIRSIINDWYTVSKFTYAPPREGHLQCTSTVTGMTVELNYNNKNRTNVTLSPQIESIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPI FAPTEVRRYTGGHERQKR+P V VQ Sbjct 237 ELGRYKLVEITPIDFAPTEVRRYTGGHERQKRIPVVLGFLGFLAAAGTAMGATATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAC59615.1| envelope glycoprotein [Simian immunodeficiency virus] Length=280 Score = 473 bits (1218), Expect = 7e-132, Method: Composition-based stats. Identities = 230/285 (80%), Positives = 245/285 (85%), Gaps = 5/285 (1%) Query 35 VHCTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKT 94 VHCT LMNTTV+TGLLLNGSY+ENRTQIWQKHR +N+S ++L NK+YNLTV C RPGNKT Sbjct 1 VHCTGLMNTTVSTGLLLNGSYAENRTQIWQKHRVNNNSVIVLFNKYYNLTVRCVRPGNKT 60 Query 95 VLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI 154 VLPVTIMAG VFHSQKYN RLRQAWCHF NWKGAWKEVKE+I+ LPK+RYRGTN +I Sbjct 61 VLPVTIMAGRVFHSQKYNTRLRQAWCHFRGNWKGAWKEVKEKIIQLPKDRYRGTNRTDQI 120 Query 155 FFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAP 214 F QRQWGDPE ANLWFNCHGEFFYCKMDWFLNYLNNLTVD C N + KS Sbjct 121 FLQRQWGDPEAANLWFNCHGEFFYCKMDWFLNYLNNLTVDRRRKPCNNNNTNKSS----- 175 Query 215 GPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVT 274 GPCVQRTYVACHIRSVI TISKKTYAPPREGHLEC STVTGMTVELNY +RTNVT Sbjct 176 GPCVQRTYVACHIRSVINDWYTISKKTYAPPREGHLECLSTVTGMTVELNYNNNDRTNVT 235 Query 275 LSPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVP 319 LSPQ+ESIWAAEL RYKLVEITPIGFAPT+VRRYTGGHERQKRVP Sbjct 236 LSPQVESIWAAELGRYKLVEITPIGFAPTDVRRYTGGHERQKRVP 280 >gb|AAF21541.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 471 bits (1212), Expect = 4e-131, Method: Composition-based stats. Identities = 231/305 (75%), Positives = 251/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFF CKMDWFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWFNCQGEFFSCKMDWFLNYINNLTVDANHNTNRCNMTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY +NRTNVTLSPQIESIWA Sbjct 178 CHIRSVVDDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQNRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLASLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAC99808.1| V2-V5 region [Simian immunodeficiency virus] Length=299 Score = 471 bits (1212), Expect = 4e-131, Method: Composition-based stats. Identities = 231/304 (75%), Positives = 251/304 (82%), Gaps = 5/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSY+ENRTQIWQKHR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYTENRTQIWQKHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW EVK++IV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFQGNWRGAWNEVKQQIVKLPKDRYQGTNDTEKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNY+NNLTVDADH++CKN S K G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDADHHQCKNNS--KKG--KAPGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 177 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNTDNRTNVTLSPQIEGIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPTE+RRY G RQKRVPFV VQ Sbjct 237 ELGRYKLVEITPIGFAPTEIRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 295 Query 346 SQHL 349 SQHL Sbjct 296 SQHL 299 >gb|AAF21534.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 471 bits (1211), Expect = 4e-131, Method: Composition-based stats. Identities = 231/305 (75%), Positives = 252/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWF C GEFFYCKMDWFLNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFTCQGEFFYCKMDWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAA99543.1| envelope protein gb|AAF21542.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 470 bits (1210), Expect = 7e-131, Method: Composition-based stats. Identities = 225/277 (81%), Positives = 246/277 (88%), Gaps = 4/277 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDAQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDWFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFV 321 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFV 274 >gb|AAF21562.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 468 bits (1205), Expect = 2e-130, Method: Composition-based stats. Identities = 229/304 (75%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHNEC TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNECNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQ RVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQMRVPFVLGFLGFLGSPGSAMGAAATPPTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21543.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 468 bits (1204), Expect = 3e-130, Method: Composition-based stats. Identities = 228/305 (74%), Positives = 251/305 (82%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSE++TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSESKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK E+V LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFSGNWRGAWEEVKREVVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYINNLTVDPNHNASRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21563.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 468 bits (1204), Expect = 3e-130, Method: Composition-based stats. Identities = 231/304 (75%), Positives = 248/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C N++ T G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKC-NSNNTSKG--KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21527.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 467 bits (1201), Expect = 6e-130, Method: Composition-based stats. Identities = 229/305 (75%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+ QIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKAQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIR V+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRFVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21546.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 466 bits (1199), Expect = 1e-129, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 244/304 (80%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21556.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 466 bits (1199), Expect = 1e-129, Method: Composition-based stats. Identities = 229/304 (75%), Positives = 245/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21555.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 466 bits (1198), Expect = 1e-129, Method: Composition-based stats. Identities = 230/304 (75%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNGCNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21547.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 465 bits (1196), Expect = 3e-129, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 247/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFY KMDWFLNYLNNLTVDADHN+C + + ++ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYYKMDWFLNYLNNLTVDADHNKCSSNNTSRG---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21528.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 465 bits (1196), Expect = 3e-129, Method: Composition-based stats. Identities = 229/305 (75%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGTV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVEL+Y ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELSYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG E QKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQESQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21531.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 464 bits (1194), Expect = 5e-129, Method: Composition-based stats. Identities = 226/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGN+T+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNRTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTN+ ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNEAQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLW +C G FFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 ANLWISCQGVFFYCKMDWFLNYINNLTVDPNHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFPAFLGATKTTMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21536.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 463 bits (1192), Expect = 7e-129, Method: Composition-based stats. Identities = 228/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYSQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 NLWFNC GEFFYCKMDWFLNY+NNLTVD +HN + N +G SG APGPCVQRTYVA Sbjct 121 PNLWFNCQGEFFYCKMDWFLNYINNLTVDPNHNTNRCNKAGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYK+VE TPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKVVESTPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21551.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 463 bits (1191), Expect = 9e-129, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 245/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYL+NLTVDADH++C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLHNLTVDADHHKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21564.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 463 bits (1191), Expect = 9e-129, Method: Composition-based stats. Identities = 226/304 (74%), Positives = 243/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN +LRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTKLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21549.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 462 bits (1189), Expect = 2e-128, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 244/304 (80%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFL YLNNLTVDADHN+C + K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLIYLNNLTVDADHNKCNEATKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IW+A Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWSA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 294 Query 346 SQHL 349 SQHL Sbjct 295 SQHL 298 >gb|AAF21544.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 462 bits (1188), Expect = 2e-128, Method: Composition-based stats. Identities = 227/305 (74%), Positives = 250/305 (81%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 A LWFNC EFFYCKMDW LNY+NNLTVDA+HN + N +G SG APGPCVQRTYVA Sbjct 121 AILWFNCQEEFFYCKMDWLLNYINNLTVDANHNTNRCNKTGKTSG---APGPCVQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+S+ TYAPPREGHLEC STVTGMTV+LNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSELTYAPPREGHLECRSTVTGMTVDLNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21550.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 462 bits (1188), Expect = 2e-128, Method: Composition-based stats. Identities = 225/304 (74%), Positives = 242/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKAKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMT+ELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTIELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPTNVRRYEAP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21565.1| envelope glycoprotein [Simian immunodeficiency virus] Length=297 Score = 460 bits (1183), Expect = 8e-128, Method: Composition-based stats. Identities = 224/304 (73%), Positives = 241/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKT+LPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTILPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNNCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IW A Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWPA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAP VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPIGFAPPNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21561.1| envelope glycoprotein [Simian immunodeficiency virus] Length=304 Score = 460 bits (1183), Expect = 9e-128, Method: Composition-based stats. Identities = 223/282 (79%), Positives = 239/282 (84%), Gaps = 12/282 (4%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNETSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGF------APTEVRRYTGGHERQKRVPFV 321 EL RYKLVEITPIGF APT VRRY G RQKRVPFV Sbjct 236 ELGRYKLVEITPIGFAPTIVPAPTSVRRYEGP-SRQKRVPFV 276 >gb|AAC99807.1| V2-V5 region [Simian immunodeficiency virus] Length=297 Score = 459 bits (1182), Expect = 9e-128, Method: Composition-based stats. Identities = 225/304 (74%), Positives = 242/304 (79%), Gaps = 7/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPG KTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGTKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQK N RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSQKSNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNTCSKDKG------KAPGPCVQRTYVAC 174 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 175 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 234 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITP+GFAPT VRRY G RQKRVPFV VQ Sbjct 235 ELGRYKLVEITPMGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 293 Query 346 SQHL 349 SQHL Sbjct 294 SQHL 297 >gb|AAF21548.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 459 bits (1180), Expect = 2e-127, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 245/304 (80%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWC+F NW+GAW+EV+E+IV LPK+RY+GT D +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCNFQGNWRGAWREVREKIVKLPKDRYQGTIDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C T G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-TTKG------KAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21538.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 459 bits (1180), Expect = 2e-127, Method: Composition-based stats. Identities = 227/306 (74%), Positives = 246/306 (80%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHY LTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYTLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNARLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWFNC GEFFYCKMDWFLNY+ NLT A+H N C N G SG APGPC QRTYV Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYIYNLTEAANHITNRC-NKGGKTSG---APGPCAQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AA L RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 237 AAGLGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALT 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAF21554.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 458 bits (1179), Expect = 3e-127, Method: Composition-based stats. Identities = 230/304 (75%), Positives = 249/304 (81%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C + + +K+ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNKCNSNNTSKA---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21559.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 456 bits (1173), Expect = 1e-126, Method: Composition-based stats. Identities = 224/304 (73%), Positives = 240/304 (78%), Gaps = 6/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPG KTVLPVTIMAGL Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGYKTVLPVTIMAGLA 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAW HF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWRHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHNEC TS K APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNECNKTSKGK-----APGPCVQRTYVAC 175 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IWAA Sbjct 176 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWAA 235 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT RRY G +QKRVPFV VQ Sbjct 236 ELGRYKLVEITPIGFAPTNGRRYEGP-SKQKRVPFVLGFLGFLGAAGTTMGAATTALAVQ 294 Query 346 SQHL 349 QHL Sbjct 295 YQHL 298 >gb|AAF21529.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 456 bits (1172), Expect = 2e-126, Method: Composition-based stats. Identities = 224/305 (73%), Positives = 247/305 (80%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQ+HR +NDS LILLNKHYNLTVTCKRPGNKT+LP+TIM +V Sbjct 1 STGLLLNGSYSENKTQIWQEHRVNNDSVLILLNKHYNLTVTCKRPGNKTLLPLTIMPAMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GT D ++I+ QRQ GDPE Sbjct 61 FHSQKYNTRLRQAWCHFTGNWRGAWEEVKREIVTLPKDRYQGTYDTQKIYLQRQLGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLW NC GEFFYCKM+WFLNY+NNLTVDA+HN + N +G SG APGPC QRTYVA Sbjct 121 ANLWLNCQGEFFYCKMEWFLNYINNLTVDANHNTNRCNKTGKTSG---APGPCAQRTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAF21540.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 456 bits (1172), Expect = 2e-126, Method: Composition-based stats. Identities = 226/306 (73%), Positives = 248/306 (81%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWF C GEF CKMDWFLNY+NNLTVDA+H N C N +G SG APGPCVQRTYV Sbjct 121 ANLWFTCQGEFSSCKMDWFLNYINNLTVDANHTTNRC-NKAGKTSG---APGPCVQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 A HIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ASHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVEITPIGFAPTEVRRYTGG +R +RVPFV Sbjct 237 AAELGRYKLVEITPIGFAPTEVRRYTGGQDRHERVPFVLGFLTFLGAAVTAMGAAATALT 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAF21560.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 454 bits (1168), Expect = 4e-126, Method: Composition-based stats. Identities = 222/304 (73%), Positives = 240/304 (78%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR NDS ++L KHYNLTV C+R GNKTVLPVT MAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVINDSVIVLFTKHYNLTVICRRSGNKTVLPVTTMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLR+AWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRKAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C + +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-------TSKGKAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTTVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21532.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 454 bits (1167), Expect = 5e-126, Method: Composition-based stats. Identities = 226/305 (74%), Positives = 247/305 (80%), Gaps = 4/305 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTN ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNGTQKIYLQRQFGDPEV 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEF CKMDWFLNY+N LTVDA+HN + NT+G SG APGPCVQ TYVA Sbjct 121 ANLWFNCQGEFSSCKMDWFLNYINILTVDANHNTNRCNTTGKTSG---APGPCVQGTYVA 177 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHIRSV+ T+SK TY PPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIWA Sbjct 178 CHIRSVVNDWYTVSKLTYPPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIWA 237 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV V Sbjct 238 AELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALTV 297 Query 345 QSQHL 349 QSQHL Sbjct 298 QSQHL 302 >gb|AAC99809.1| V2-V5 region [Simian immunodeficiency virus] Length=300 Score = 453 bits (1165), Expect = 1e-125, Method: Composition-based stats. Identities = 220/304 (72%), Positives = 246/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQ+WQKHR +NDS +IL NKHYNLT TC RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQVWQKHRVNNDSVIILFNKHYNLTATCGRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN +LRQAWCHF NW+GAW+EVKEEI+ LP++R++GT D KRIF QRQ+GDPE Sbjct 61 FHSQKYNTKLRQAWCHFQGNWRGAWREVKEEIIKLPQDRFQGTTDTKRIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNCHGEFF+CK+DWF NYLNNLT + DHN+C++ + S N+RAPGP VQRTYVAC Sbjct 121 ANLWFNCHGEFFFCKLDWFPNYLNNLTGNPDHNKCEHNN---SSNRRAPGPRVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI +I+K+TYAPPREGHL+CTS VTGMTVEL Y KNRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYSITKRTYAPPREGHLQCTSPVTGMTVELIYNTKNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT+VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTDVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAC99810.1| V2-V5 region [Simian immunodeficiency virus] Length=300 Score = 451 bits (1161), Expect = 3e-125, Method: Composition-based stats. Identities = 220/304 (72%), Positives = 241/304 (79%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQK+ SNDS LIL NKHYNLTVTC+RPGNKT LPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQKNGNSNDSVLILFNKHYNLTVTCRRPGNKTALPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKY RLRQAWCHF NW+GAW+EV+++++ LP + Y+GT + +RI+ QR++GDPE Sbjct 61 FHSQKYYTRLRQAWCHFQGNWEGAWREVQKKLIGLPTDNYQGTINTERIYLQREFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 NLW C GEF YCKMDW LNY+NNLTVDADHN C+NTS APGPCVQRTYVAC Sbjct 121 DNLWSTCQGEFLYCKMDWLLNYINNLTVDADHNRCQNTSDKGP----APGPCVQRTYVAC 176 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI T+SKKTYAPPREGHLECTSTVTGMTVELNY KNRTNVTLSPQI+ IWAA Sbjct 177 HIRSVINDWYTVSKKTYAPPREGHLECTSTVTGMTVELNYNNKNRTNVTLSPQIDGIWAA 236 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRYTGGHERQKR PFV VQ Sbjct 237 ELGRYKLVEITPIGFAPTNVRRYTGGHERQKRAPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21557.1| envelope glycoprotein [Simian immunodeficiency virus] Length=296 Score = 451 bits (1160), Expect = 3e-125, Method: Composition-based stats. Identities = 228/304 (75%), Positives = 246/304 (80%), Gaps = 8/304 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHY LTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYILTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN+C T+ G +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNQC-----TRKG--KAPGPCVQRTYVAC 173 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 174 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 233 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 234 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 292 Query 346 SQHL 349 SQHL Sbjct 293 SQHL 296 >gb|AAF21552.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 451 bits (1159), Expect = 4e-125, Method: Composition-based stats. Identities = 227/304 (74%), Positives = 246/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RYRGTND +IF QRQ+G PE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYRGTNDTSKIFLQRQFGHPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFY KMDWFLNYLNNLTVDADHN+C +++ +K +APGPCV RTYVAC Sbjct 121 ANLWFNCQGEFFYYKMDWFLNYLNNLTVDADHNKCDSSNTSKG---KAPGPCVHRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQIE IWAA Sbjct 178 HIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWAA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21558.1| envelope glycoprotein [Simian immunodeficiency virus] Length=300 Score = 447 bits (1149), Expect = 7e-124, Method: Composition-based stats. Identities = 223/304 (73%), Positives = 244/304 (80%), Gaps = 4/304 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS ++L NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIVLFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY+GT D +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYQGTTDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVAC 225 ANLWFNC GEFFYCKMDWFLNYLNNL VDADHN+C + + ++ +APGPCVQRTYVAC Sbjct 121 ANLWFNCQGEFFYCKMDWFLNYLNNLPVDADHNQCSSNNTSRG---KAPGPCVQRTYVAC 177 Query 226 HIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAA 285 HIRSVI TISKKTYAPPR GHL+CTSTVTGMTVELNY NRTNVTLSPQIE IW A Sbjct 178 HIRSVINDWYTISKKTYAPPRGGHLQCTSTVTGMTVELNYNNNNRTNVTLSPQIEGIWPA 237 Query 286 ELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQ 345 EL RYKLVEITPIGFAPT VRRY G RQKRVPFV VQ Sbjct 238 ELGRYKLVEITPIGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTVQ 296 Query 346 SQHL 349 SQHL Sbjct 297 SQHL 300 >gb|AAF21553.1| envelope glycoprotein [Simian immunodeficiency virus] Length=298 Score = 443 bits (1140), Expect = 7e-123, Method: Composition-based stats. Identities = 223/305 (73%), Positives = 239/305 (78%), Gaps = 8/305 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSENRTQIWQ+HR +NDS +IL NKHYNLTVTC+RPGNKTVLPVTIMAGLV Sbjct 1 STGLLLNGSYSENRTQIWQRHRVNNDSVIILFNKHYNLTVTCRRPGNKTVLPVTIMAGLV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHS KYN RLRQAWCHF NW+GAW+EV+E+IV LPK+RY GTND +IF QRQ+GDPE Sbjct 61 FHSHKYNTRLRQAWCHFQGNWRGAWREVREKIVKLPKDRYHGTNDTSKIFLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMD-WFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVA 224 ANLWFNC GEFFYCKMD WFLNYLNN VDADHN C T+ N +APGPCVQRTYVA Sbjct 121 ANLWFNCQGEFFYCKMDVWFLNYLNN-PVDADHNVCNKTT-----NGKAPGPCVQRTYVA 174 Query 225 CHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWA 284 CHI +VI TISKKTYAPPREGHL+CTSTVTGMTVELNY NRTNVTLSPQI IW Sbjct 175 CHISTVINDWCTISKKTYAPPREGHLQCTSTVTGMTVELNYNNDNRTNVTLSPQIGGIWP 234 Query 285 AELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXV 344 AEL RYKLVEITP GFAPT VRRY G RQKRVPFV V Sbjct 235 AELGRYKLVEITPSGFAPTNVRRYEGP-SRQKRVPFVLGFLGFLGAAGTAMGAAATALTV 293 Query 345 QSQHL 349 QSQHL Sbjct 294 QSQHL 298 >gb|AAF21526.1| envelope glycoprotein [Simian immunodeficiency virus] Length=302 Score = 441 bits (1135), Expect = 3e-122, Method: Composition-based stats. Identities = 221/306 (72%), Positives = 243/306 (79%), Gaps = 6/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV LP++RY+GTND ++I+ QRQ+GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVTLPQDRYQGTNDTQKIYLQRQFGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLWF GEFF C+MDW NY+ L DA+H N C N +G SG APGPCVQRTYV Sbjct 121 ANLWFKRQGEFFSCEMDWVPNYIYILRADANHTTNRC-NKTGKTSG---APGPCVQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLEFRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVEITPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 237 AAELGRYKLVEITPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGAAGTAMGAAATALA 296 Query 344 VQSQHL 349 VQSQHL Sbjct 297 VQSQHL 302 >gb|AAX09393.1| envelope glycoprotein [Simian immunodeficiency virus] Length=249 Score = 441 bits (1134), Expect = 3e-122, Method: Composition-based stats. Identities = 214/253 (84%), Positives = 227/253 (89%), Gaps = 4/253 (1%) Query 37 CTNLMNTTVTTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVL 96 CT LMNTTVTTGLLLNGSYSENRTQIWQKHR +NDS L+L NK+YNLTVTCKRPGNKTVL Sbjct 1 CTGLMNTTVTTGLLLNGSYSENRTQIWQKHRVNNDSVLVLFNKYYNLTVTCKRPGNKTVL 60 Query 97 PVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFF 156 PVTIMAGLVFHSQKYN+RLRQAWCHF NWKGAWKEVK+E+V LPK+RY+GTND ++IF Sbjct 61 PVTIMAGLVFHSQKYNMRLRQAWCHFQGNWKGAWKEVKQELVKLPKDRYQGTNDTEKIFL 120 Query 157 QRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGP 216 QRQ+GDPE ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C +T K GN APGP Sbjct 121 QRQFGDPEAANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNSCNSTK--KGGN--APGP 176 Query 217 CVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLS 276 CVQRTYVACHIRSVI TISKKTYAPPREGHL+CTSTVTGMTVELNYI NRTNVTLS Sbjct 177 CVQRTYVACHIRSVINDWYTISKKTYAPPREGHLQCTSTVTGMTVELNYIKNNRTNVTLS 236 Query 277 PQIESIWAAELDR 289 PQIESIWAAEL R Sbjct 237 PQIESIWAAELGR 249 >gb|AAX09392.1| envelope glycoprotein [Simian immunodeficiency virus] Length=314 Score = 432 bits (1110), Expect = 2e-119, Method: Composition-based stats. Identities = 212/315 (67%), Positives = 245/315 (77%), Gaps = 11/315 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 RLRYCAPAG+ALL+C D +Y G +C+NVSV CT L+NTTV+TG+ +NGSY+ENRT+ Sbjct 11 FRLRYCAPAGYALLRCRDKNYTG-SNDCTNVSVSACTRLINTTVSTGIGINGSYTENRTE 69 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQ+ SNDS +I LN++YNLT+ C+RPGNKTVLPVTIMAGLVFHSQKYN +L+QAWC Sbjct 70 IWQEDGNSNDSVIIRLNRYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNTKLKQAWCW 129 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F W+ AW+EVKEEIV LP RY+GTND +I+ QRQWGDPE +FNC GEFFYCKM Sbjct 130 FGGKWRQAWQEVKEEIVKLPPARYQGTNDTSKIYLQRQWGDPEAEFFFFNCQGEFFYCKM 189 Query 182 DWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKT 241 DWFLNYLNN +VD DHN+C T+ K C QRTYV CHIR V+ T+SKKT Sbjct 190 DWFLNYLNNQSVDPDHNKCNKTNDKK---------CWQRTYVPCHIRQVVNDWYTLSKKT 240 Query 242 YAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFA 301 YAPPREG LEC ST T + VE+NY KNRTNVTLSPQI SIWA EL YKLVEI PIGFA Sbjct 241 YAPPREGQLECNSTATALYVEINYNSKNRTNVTLSPQIRSIWANELGDYKLVEIKPIGFA 300 Query 302 PTEVRRYTGGHERQK 316 PT+VRRYTG ERQK Sbjct 301 PTDVRRYTGP-ERQK 314 >gb|AAF21530.1| envelope glycoprotein [Simian immunodeficiency virus] Length=303 Score = 427 bits (1099), Expect = 4e-118, Method: Composition-based stats. Identities = 215/306 (70%), Positives = 236/306 (77%), Gaps = 5/306 (1%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMA-GL 104 +TGLLL GSYSEN+TQIWQ+HR +NDS LILLNKH+NLTVTC RPGNKT L G+ Sbjct 1 STGLLLIGSYSENKTQIWQEHRVNNDSVLILLNKHHNLTVTCMRPGNKTTLACHYHGPGM 60 Query 105 VFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPE 164 VFHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ QRQ+GDPE Sbjct 61 VFHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIYLQRQFGDPE 120 Query 165 TANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECK-NTSGTKSGNKRAPGPCVQRTYV 223 ANLWFNC GEFF CKMDWFLNY+ LTVDA+HN + T+G SG APGPCVQRTYV Sbjct 121 AANLWFNCQGEFFSCKMDWFLNYIYTLTVDANHNTNRCTTTGKTSG---APGPCVQRTYV 177 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T K TY PPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 178 ACHIRSVVNDWYTDKKLTYPPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 237 Query 284 AAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXX 343 AAEL RYKLVE TPIGFAPTEVRRYTGG ERQKRVPFV Sbjct 238 AAELGRYKLVEFTPIGFAPTEVRRYTGGQERQKRVPFVLGFLAFLGTTGTPMGAAATALT 297 Query 344 VQSQHL 349 VQSQHL Sbjct 298 VQSQHL 303 >gb|AAA47593.1| glycoprotein 120 Length=486 Score = 421 bits (1081), Expect = 6e-116, Method: Composition-based stats. Identities = 207/311 (66%), Positives = 241/311 (77%), Gaps = 10/311 (3%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 LRLRYCAPA A+LKC D +Y GF T C NVSVV CT LMNTTV++ LNGS +ENRT+ Sbjct 180 LRLRYCAPAAVAILKCKDTNYTGFGT-CRNVSVVSCTGLMNTTVSSAFGLNGSQAENRTE 238 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 IWQKH SNDS +I LNKHYNLT+ C+RPGNKTVLPVTIMAG+VFHSQKYN +LRQAWCH Sbjct 239 IWQKHGVSNDSVIIKLNKHYNLTILCRRPGNKTVLPVTIMAGMVFHSQKYNTKLRQAWCH 298 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKM 181 F +WKGAWKEV+E IV LPK +Y+GTND K+I+ +RQWGDPE A++WFNC GEFFYC Sbjct 299 FQGDWKGAWKEVRETIVKLPKHKYQGTNDTKKIWLRRQWGDPEAASIWFNCLGEFFYCTP 358 Query 182 DWFLNYLNNLT-----VDADHNECKN-TSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLE 235 DWFLNYLNN + D + N C N TSG +G+ R C++RTYV HIRSV+ Sbjct 359 DWFLNYLNNESSEGSFTDVEGNRCSNITSGGLTGSTRK---CLKRTYVGLHIRSVVNDWY 415 Query 236 TISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEI 295 T+ +K YAPPREGHLEC STVT M V L+Y KN TNVTL+ +E+IWA EL RYKL+EI Sbjct 416 TLLQKRYAPPREGHLECRSTVTSMLVSLDYNDKNMTNVTLTANLENIWAYELGRYKLIEI 475 Query 296 TPIGFAPTEVR 306 PIGFAPTEVR Sbjct 476 KPIGFAPTEVR 486 >gb|AAF21537.1| envelope glycoprotein [Simian immunodeficiency virus] Length=257 Score = 393 bits (1009), Expect = 1e-107, Method: Composition-based stats. Identities = 194/250 (77%), Positives = 212/250 (84%), Gaps = 6/250 (2%) Query 46 TTGLLLNGSYSENRTQIWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLV 105 +TGLLLNGSYSEN+TQIWQKHR +NDS LILLNKHYNLTVTCKRPGNKT+LPVTIMAG+V Sbjct 1 STGLLLNGSYSENKTQIWQKHRVNNDSVLILLNKHYNLTVTCKRPGNKTILPVTIMAGMV 60 Query 106 FHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWGDPET 165 FHSQKYN RLRQAWCHF NW+GAW+EVK EIV PK+RY+GTND ++I+ RQ GDPE Sbjct 61 FHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKSPKDRYQGTNDTQKIYLHRQVGDPEA 120 Query 166 ANLWFNCHGEFFYCKMDWFLNYLNNLTVDADH--NECKNTSGTKSGNKRAPGPCVQRTYV 223 ANLW NC GEFFYCKMDW LNY+NNLTVDA+H N C N G SG APGPC QRTYV Sbjct 121 ANLWINCQGEFFYCKMDWPLNYINNLTVDANHDANRC-NEGGKTSG---APGPCAQRTYV 176 Query 224 ACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIW 283 ACHIRSV+ T+SK TYAPPREGHLE STVTGMTVELNY ++RTNVTLSPQIESIW Sbjct 177 ACHIRSVVNDWYTVSKLTYAPPREGHLESRSTVTGMTVELNYNNQSRTNVTLSPQIESIW 236 Query 284 AAELDRYKLV 293 AAEL RYKLV Sbjct 237 AAELGRYKLV 246 >gb|AAF21545.1| envelope glycoprotein [Simian immunodeficiency virus] Length=252 Score = 374 bits (959), Expect = 8e-102, Method: Composition-based stats. Identities = 181/254 (71%), Positives = 199/254 (78%), Gaps = 2/254 (0%) Query 96 LPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIF 155 +PVTIMAG+VFHSQKYN RLRQAWCHF NW+GAW+EVK EIV LPK+RY+GTND ++I+ Sbjct 1 MPVTIMAGMVFHSQKYNTRLRQAWCHFNGNWRGAWEEVKREIVKLPKDRYQGTNDTQKIY 60 Query 156 FQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPG 215 QRQ+GDPE ANLWFNC GEFFYCKMDW LNY+NNLTVD +HN + G K+ APG Sbjct 61 LQRQFGDPEAANLWFNCQGEFFYCKMDWLLNYINNLTVDPNHNANRCNKGGKTSG--APG 118 Query 216 PCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTL 275 PCVQRTYVACHIRSV+ T+SK TYAPPREGHLEC STVTGMTVELNY ++RTNVTL Sbjct 119 PCVQRTYVACHIRSVVNDWYTVSKLTYAPPREGHLECRSTVTGMTVELNYNNQSRTNVTL 178 Query 276 SPQIESIWAAELDRYKLVEITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXX 335 SPQIESIWAAEL YKLVEITPIGFAPTEVRRYTGG E QKRVPFV Sbjct 179 SPQIESIWAAELGGYKLVEITPIGFAPTEVRRYTGGQESQKRVPFVLGFLAFLGAAGTAM 238 Query 336 XXXXXXXXVQSQHL 349 VQSQHL Sbjct 239 GAAATALTVQSQHL 252 >dbj|BAA82439.1| envelope glycoprotein [Simian immunodeficiency virus - agm] Length=214 Score = 370 bits (950), Expect = 8e-101, Method: Composition-based stats. Identities = 176/217 (81%), Positives = 189/217 (87%), Gaps = 3/217 (1%) Query 87 CKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYR 146 C+RPGNKTVLPVTIMAGLV HSQKYN RLRQAWCHF NW+GAW+EV+E+IV LPKERY+ Sbjct 1 CRRPGNKTVLPVTIMAGLVIHSQKYNTRLRQAWCHFQGNWRGAWREVREKIVQLPKERYQ 60 Query 147 GTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGT 206 GTND +I+ QRQWGDPE ANLWFNC GEFFYCKMDWFLNYLNNLTVDADHN C NT Sbjct 61 GTNDTSQIYLQRQWGDPEAANLWFNCQGEFFYCKMDWFLNYLNNLTVDADHNVCNNTGKK 120 Query 207 KSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYI 266 KS +APGPC QRTYVACHIRSV+ T+SK TYAPPREGHL+CTSTVT M VELNY Sbjct 121 KS---KAPGPCAQRTYVACHIRSVVNDWYTLSKLTYAPPREGHLQCTSTVTIMAVELNYN 177 Query 267 PKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFAPT 303 PKNRTNVTLSPQIE+IWAAEL RYKLVEITPIGFAPT Sbjct 178 PKNRTNVTLSPQIENIWAAELGRYKLVEITPIGFAPT 214 >dbj|BAA82408.1| env of SIVagm [Simian immunodeficiency virus - agm] Length=212 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 171/217 (78%), Positives = 188/217 (86%), Gaps = 5/217 (2%) Query 87 CKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCHFPSNWKGAWKEVKEEIVNLPKERYR 146 C+RPGNKTVLPVTIMAGLVFH QKYN RLRQAWCHF NW+GAW+EV+++IV LPKERY+ Sbjct 1 CRRPGNKTVLPVTIMAGLVFHFQKYNNRLRQAWCHFQDNWRGAWREVRKKIVQLPKERYQ 60 Query 147 GTNDPKRIFFQRQWGDPETANLWFNCHGEFFYCKMDWFLNYLNNLTVDADHNECKNTSGT 206 GTND +I QRQWGDPE ANLWFNC G+FFYCK+DWFLNYLNNLTVDADHN C +T Sbjct 61 GTNDTSQIHLQRQWGDPEAANLWFNCQGKFFYCKLDWFLNYLNNLTVDADHNPCNSTRKG 120 Query 207 KSGNKRAPGPCVQRTYVACHIRSVIIWLETISKKTYAPPREGHLECTSTVTGMTVELNYI 266 K APGPCVQRTYVACHIRSV+ T+SK TYAPPREGHL+C+STVTGMTVELNY Sbjct 121 K-----APGPCVQRTYVACHIRSVVNDWYTLSKLTYAPPREGHLQCSSTVTGMTVELNYN 175 Query 267 PKNRTNVTLSPQIESIWAAELDRYKLVEITPIGFAPT 303 KNRTNVTLSPQIE+IWAAEL RYKLV+ITPIGFAPT Sbjct 176 SKNRTNVTLSPQIENIWAAELGRYKLVKITPIGFAPT 212 >gb|AAT41729.1| Env [Simian immunodeficiency virus] Length=737 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 181/379 (47%), Positives = 238/379 (62%), Gaps = 16/379 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T + NG+ +ENRT Sbjct 229 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWVGFNGTRAENRTY 288 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GL+FHSQ N R +QAWC Sbjct 289 IYWHSRS--NRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLIFHSQSINKRPKQAWCW 346 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +W+GA +EVKE IV P RY GTN+ K I + GDPE +W NC GEF YCK Sbjct 347 FGGSWRGAIQEVKETIVKHP--RYTGTNNTKYINLTAPRGGDPEVTFMWTNCRGEFLYCK 404 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NTSG+ ++ +R YV CHIR +I + K Sbjct 405 MNWFLNWV----------EDRNTSGSL-WTEQTKAEQQKRNYVPCHIRQIINTWHRVGKN 453 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N+TN+++S ++ ++ EL YKLVEITPIG Sbjct 454 VYLPPREGDLTCNSTVTSLIADIDWIDGNQTNISMSAEVAELYRLELGDYKLVEITPIGL 513 Query 301 APTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKNL 360 APT +RRYT G R KR FV QS+ LLAGI+QQQ+ L Sbjct 514 APTSIRRYTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQL 573 Query 361 LAAVEAQQQMLKLTIWGVK 379 L V+ QQ++L+LT+WG K Sbjct 574 LDVVKRQQELLRLTVWGTK 592 >gb|AAP46095.1| envelope glycoprotein [Simian immunodeficiency virus] Length=875 Score = 331 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 186/380 (48%), Positives = 230/380 (60%), Gaps = 26/380 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGNWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLN++ E +NT+ K +R YV CHIR +I + K Sbjct 404 MDWFLNWV----------EDRNTTKQKP----------KRNYVPCHIRQIINTWHKVGKN 443 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I NRTN+T+S ++ ++ EL YKLVEITPIG Sbjct 444 VYLPPREGDLACNSTVTSLIANIDWIDGNRTNITMSAEVAELYRLELGDYKLVEITPIGL 503 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY TGG R KR FV QS+ LLAGI QQQ+ Sbjct 504 APTSVRRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIGQQQQQ 563 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 564 LLDVVKRQQELLRLTVWGTK 583 >gb|AAC68662.1| Env [Simian immunodeficiency virus] Length=885 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 185/385 (48%), Positives = 237/385 (61%), Gaps = 28/385 (7%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 233 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 292 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GL+FHSQ N R +QAWC Sbjct 293 IYWHSRS--NRTIISLNKYYNLTIRCRRPGNKTVLPVTIMSGLIFHSQPINERPKQAWCW 350 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F +W+ A +EVKE IV P RY GTN+ K+I G DPE +W NC GEF YCK Sbjct 351 FGGSWREAIQEVKETIVKHP--RYTGTNETKKINLTAPGGGDPEVTFMWTNCRGEFLYCK 408 Query 181 MDWFLNYLNNLTVDADHNECKNTSG------TKSGNKRAPGPCVQRTYVACHIRSVIIWL 234 M+WFLN++ E +NTSG TK+ K+ R YV CHIR +I Sbjct 409 MNWFLNWV----------EDRNTSGSLWTQQTKADEKK-------RNYVPCHIRQIINTW 451 Query 235 ETISKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVE 294 + K Y PPREG L C STVT + ++++I N+TN+T+S ++ ++ EL YKLVE Sbjct 452 HRVGKNVYLPPREGDLTCNSTVTSLIADIDWIDGNQTNITMSAEVAELYRLELGDYKLVE 511 Query 295 ITPIGFAPTEVRRYTGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGIL 354 ITPIG APT VRRYT G R KR FV QS+ LLAGI+ Sbjct 512 ITPIGLAPTSVRRYTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTRSAQSRTLLAGIV 571 Query 355 QQQKNLLAAVEAQQQMLKLTIWGVK 379 QQQ+ LL V+ QQ++L+LT+WG K Sbjct 572 QQQQQLLDVVKRQQELLRLTVWGTK 596 >gb|AAK64201.1| env protein [Simian immunodeficiency virus 17E-Cl] Length=879 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ+ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQAWCW 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTN+ +I + GDPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + K Sbjct 404 MNWFLNWV----------EDRNTANQK------PKEQHKRNYVPCHIRQIINTWHKVGKN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTDVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAO67286.1| envelope glycoprotein [Simian immunodeficiency virus] Length=887 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 234/380 (61%), Gaps = 17/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 231 IRFRYCAPPGYALLRCNDSNYSGFAPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 290 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ H SN + +I LNK+YNLT+ CKRPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 291 IYW-HGNSNRT-IITLNKYYNLTIKCKRPGNKTVLPVTIMSGLVFHSQTINTRPKQAWCW 348 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F NW A +EVKE +V P RY GTND ++I G+PE +W NC GEF YCK Sbjct 349 FEGNWSKAIQEVKETLVKHP--RYTGTNDTRKINLTAPARGNPEVTFMWTNCRGEFLYCK 406 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ D D N + +S K+ R YV CHIR +I + K Sbjct 407 MNWFLNWVE----DRDQNSNRWKQQKESEQKK-------RNYVPCHIRQIINTWHKVGKN 455 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N TN+T+S ++ ++ EL YKLVEITPIG Sbjct 456 VYLPPREGDLTCNSTVTSLIAKIDWINNNETNITMSAEVAELYRLELGDYKLVEITPIGL 515 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+VRRY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 516 APTDVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQ 575 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 576 LLDVVKRQQELLRLTVWGTK 595 >gb|AAP46096.1| envelope glycoprotein [Simian immunodeficiency virus] Length=873 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 230/380 (60%), Gaps = 26/380 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 226 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 285 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 286 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 343 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GT D +I G DPE +W NC GEF YCK Sbjct 344 FGGNWKDAIKEVKQTIVKHP--RYTGTKDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 401 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 MDWFLN++ E +NT+ K +R YV CHIR +I + K Sbjct 402 MDWFLNWV----------EDRNTTKQKP----------KRNYVPCHIRQIINTWHKVGKN 441 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 442 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 501 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 502 APTSVRRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 561 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 562 LLDVVKRQQELLRLTVWGTK 581 >gb|AAA91937.1| env protein Length=880 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 20/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ + ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYW--HSKDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTN+ +I G DPE +W NC GEF YCK Sbjct 346 FEGNWKEAIKEVKQTIVKHP--RYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E KN +GT + P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDKNLTGTT----QKPQERHKRNYVPCHIRQIINTWHKVGRN 449 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 450 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 509 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 510 APTNVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 569 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 570 LLDVVKRQQELLRLTVWGTK 589 >gb|AAV69864.1| envelope glycoprotein [SIV vector pCLN8] Length=735 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 20/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ + ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 288 IYW--HSKDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F NWK A KEVK+ IV P RY GTN+ +I G DPE +W NC GEF YCK Sbjct 346 FEGNWKEAIKEVKQTIVKHP--RYTGTNNTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E KN +GT + P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDKNLTGTT----QKPQERHKRNYVPCHIRQIINTWHKVGRN 449 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 450 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 509 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 510 APTNVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 569 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 570 LLDVVKRQQELLRLTVWGTK 589 >gb|AAZ52606.1| envelope glycoprotein [Simian immunodeficiency virus SIVmac] Length=879 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 231/380 (60%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R RQAWC Sbjct 288 IYWHGR--DNGTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPRQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDRNTTNQK------PNEQHKRNYVPCHIRQIINTWHKVGRN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTHVKRYTTGGTSRNKRGVFVLGSLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAX85828.2| envelope glycoprotein [Simian immunodeficiency virus] Length=886 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 187/382 (48%), Positives = 236/382 (61%), Gaps = 21/382 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 230 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 289 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 290 IYWHGRS--NRTIISLNKFYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 347 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +WK A +EVKE IV P RY GTND K+I + GDPE +W NC GEF YCK Sbjct 348 FGGSWKKAIQEVKETIVKHP--RYTGTNDTKKINLTAPRGGDPEVTFMWTNCRGEFLYCK 405 Query 181 MDWFLNYLNNLTVDADHNECKNTSGT--KSGNKRAPGPCVQRTYVACHIRSVIIWLETIS 238 M+WFLN++ E ++T+G K N+ G +R YV CHIR +I + Sbjct 406 MNWFLNWV----------EDRDTNGNIWKQQNR---GEQQKRNYVPCHIRQIINTWHKVG 452 Query 239 KKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPI 298 K Y PPREG L C STVT + +++I NRTN+T+S ++ ++ EL YKLVEITPI Sbjct 453 KNVYLPPREGDLTCNSTVTSLIANIDWIDGNRTNITMSAEVAELYRLELGDYKLVEITPI 512 Query 299 GFAPTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQ 357 G APT VRRY T G R KR FV QS+ LLAGI+QQQ Sbjct 513 GLAPTNVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQ 572 Query 358 KNLLAAVEAQQQMLKLTIWGVK 379 + LL V+ QQ++L+LT+WG K Sbjct 573 QQLLDVVKRQQELLRLTVWGTK 594 >gb|AAK64192.1| truncated envelope glycoprotein [Simian immunodeficiency virus 17E-Fr] Length=763 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 234/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ+ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTIKCRRPGNKTVLPVTIMSGLVFHSQRINDRPRQAWCW 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTN+ +I + GDPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + K Sbjct 404 MNWFLNWV----------EDRNTANQK------PKEQHKRNYVPCHIRQIINTWHKVGKN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT+V+RY TGG R KR FV QS+ LLAGI+QQQ+ Sbjct 508 APTDVKRYTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAA47765.1| envelope polyprotein Length=773 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 235/380 (61%), Gaps = 18/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF NC+ V V CT +M T +T NG+ +ENRT Sbjct 236 IRFRYCAPPGYALLRCNDSNYSGFAPNCTKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 295 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 296 IYWHGRS--NRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 353 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A +EVKE +V P RY GTND K+I G DPE ++W NC GEF YCK Sbjct 354 FGGEWKKAIQEVKETLVKHP--RYTGTNDTKQIKLTAPGGGDPEVTHMWTNCRGEFLYCK 411 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ ++ KN S S N++ +R YV CHIR +I + K Sbjct 412 MNWFLNWVEDI---------KNGSRWTSQNQKERQ---RRNYVPCHIRQIINTWHKVGKN 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + E+++I N TN+T+S ++ ++ EL YKLVEITPI F Sbjct 460 VYLPPREGDLTCNSTVTSLIAEIDWINGNETNITMSAEVAQLYRLELGDYKLVEITPIAF 519 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 520 APTSVKRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTLSAQSRTLLAGIVQQQQQ 579 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V QQ++L+LT+WG K Sbjct 580 LLDVVTRQQELLRLTVWGTK 599 >gb|AAA47773.1| envelope polyprotein Length=773 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 183/380 (48%), Positives = 235/380 (61%), Gaps = 18/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF NC+ V V CT +M T +T NG+ +ENRT Sbjct 236 IRFRYCAPPGYALLRCNDSNYSGFAPNCTKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 295 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 296 IYWHGRS--NRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 353 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A +EVKE +V P RY GTND K+I G DPE ++W NC GEF YCK Sbjct 354 FGGEWKKAIQEVKETLVKHP--RYTGTNDTKQIKLTAPGGGDPEVTHMWTNCRGEFLYCK 411 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ ++ KN S S N++ +R YV CHIR +I + K Sbjct 412 MNWFLNWVEDI---------KNGSRWTSQNQKERQ---RRNYVPCHIRQIINTWHKVGKN 459 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + E+++I N TN+T+S ++ ++ EL YKLVEITPI F Sbjct 460 VYLPPREGDLTCNSTVTSLIAEIDWINGNETNITMSAEVAQLYRLELGDYKLVEITPIAF 519 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 520 APTSVKRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASVTLSAQSRTLLAGIVQQQQQ 579 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V QQ++L+LT+WG K Sbjct 580 LLDVVTRQQELLRLTVWGTK 599 >gb|AAX85833.2| envelope glycoprotein [Simian immunodeficiency virus] Length=857 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 185/383 (48%), Positives = 237/383 (61%), Gaps = 23/383 (6%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF NCS V V CT +M T +T NG+ +ENRT Sbjct 232 IRFRYCAPPGYALLRCNDTNYSGFAPNCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 291 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R+ + +I LNK YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 292 IYWHGRS--NRTIISLNKFYNLTIRCRRPGNKTVLPVTIMSGLVFHSQPINERPKQAWCW 349 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F +WK A +EVKE IV P RY GTND K+I + GDPE +W NC GEF YCK Sbjct 350 FGGSWKKAIQEVKETIVKHP--RYTGTNDTKKINLTAPRGGDPEVTFMWTNCRGEFLYCK 407 Query 181 MDWFLNYLNNLTVDADHNECKNTSGT---KSGNKRAPGPCVQRTYVACHIRSVIIWLETI 237 M+WFLN++ E ++T+GT + NK +R YV CHIR ++ + Sbjct 408 MNWFLNWV----------EDRDTNGTIWKQQNNKEQQ----KRNYVPCHIRQIVNTWHKV 453 Query 238 SKKTYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITP 297 K Y PPREG L C STVT + ++++I N+TN+T+S ++ ++ EL YKLVEITP Sbjct 454 GKNVYLPPREGDLTCNSTVTSLIADIDWIDNNQTNITMSAEVAELYRLELGDYKLVEITP 513 Query 298 IGFAPTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQ 356 IG APT VRRY T G R KR FV QS+ LLAGI+QQ Sbjct 514 IGLAPTSVRRYTTTGAPRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQ 573 Query 357 QKNLLAAVEAQQQMLKLTIWGVK 379 Q+ LL V+ QQ++L+LT+WG K Sbjct 574 QQQLLDVVKRQQELLRLTVWGTK 596 >gb|AAZ52607.1| envelope glycoprotein [Simian immunodeficiency virus SIVmac] Length=879 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 232/380 (61%), Gaps = 22/380 (5%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND +Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 228 IRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 287 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ R ++ +I LNK+YNLT+ C+RPGNKTVLPVTIM+GLVFHSQ N R RQAWC Sbjct 288 IYWHGR--DNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPRQAWCR 345 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRIFFQRQWG-DPETANLWFNCHGEFFYCK 180 F WK A KEVK+ IV P RY GTND +I G DPE +W NC GEF YCK Sbjct 346 FGGKWKDAIKEVKQTIVKHP--RYTGTNDTDKINLTAPGGGDPEVTFMWTNCRGEFLYCK 403 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ E +NT+ K P +R YV CHIR +I + + Sbjct 404 MNWFLNWV----------EDRNTTNQK------PNEQHKRNYVPCHIRQIINTRHKVGRN 447 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + +++I N+TN+T+S ++ ++ EL YKLVEITPIG Sbjct 448 VYLPPREGDLTCNSTVTSLIANIDWIDGNQTNITMSAEVAELYRLELGDYKLVEITPIGL 507 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT V+RY TGG R KR FV X QS+ LLAGI+QQQ+ Sbjct 508 APTHVKRYTTGGTSRNKRGVFVLGFXGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQ 567 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 568 LLDVVKRQQELLRLTVWGTK 587 >gb|AAO67291.1| envelope glycoprotein [Simian immunodeficiency virus] Length=887 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 184/380 (48%), Positives = 233/380 (61%), Gaps = 17/380 (4%) Query 2 LRLRYCAPAGFALLKCNDADYDGFKTNCSNVSVVHCTNLMNTTVTTGLLLNGSYSENRTQ 61 +R RYCAP G+ALL+CND++Y GF CS V V CT +M T +T NG+ +ENRT Sbjct 231 IRFRYCAPPGYALLRCNDSNYSGFAPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY 290 Query 62 IWQKHRTSNDSALILLNKHYNLTVTCKRPGNKTVLPVTIMAGLVFHSQKYNLRLRQAWCH 121 I+ H SN + +I LNK+YNLT+ CKRPGNKTVLPVTIM+GLVFHSQ N R +QAWC Sbjct 291 IYW-HGNSNRT-IISLNKYYNLTIRCKRPGNKTVLPVTIMSGLVFHSQTINTRPKQAWCW 348 Query 122 FPSNWKGAWKEVKEEIVNLPKERYRGTNDPKRI-FFQRQWGDPETANLWFNCHGEFFYCK 180 F NW A +EVKE +V P RY GTND ++I G+PE +W NC GEF YCK Sbjct 349 FEGNWSKAIQEVKETLVKHP--RYTGTNDTRKINLTAPARGNPEVTFMWTNCRGEFLYCK 406 Query 181 MDWFLNYLNNLTVDADHNECKNTSGTKSGNKRAPGPCVQRTYVACHIRSVIIWLETISKK 240 M+WFLN++ D D N + +S K+ R YV CHIR +I + K Sbjct 407 MNWFLNWVE----DRDQNSNRWKQQKESEQKK-------RNYVPCHIRQIINAWHKVGKN 455 Query 241 TYAPPREGHLECTSTVTGMTVELNYIPKNRTNVTLSPQIESIWAAELDRYKLVEITPIGF 300 Y PPREG L C STVT + ++++I N TN+T+S ++ ++ EL YKLVEITPIG Sbjct 456 VYLPPREGDLTCNSTVTSLIAKIDWINNNETNITMSAEVAELYRLELGDYKLVEITPIGL 515 Query 301 APTEVRRY-TGGHERQKRVPFVXXXXXXXXXXXXXXXXXXXXXXVQSQHLLAGILQQQKN 359 APT VRRY T G R KR FV QS+ LLAGI+QQQ+ Sbjct 516 APTNVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTLLAGIVQQQQQ 575 Query 360 LLAAVEAQQQMLKLTIWGVK 379 LL V+ QQ++L+LT+WG K Sbjct 576 LLDVVKRQQELLRLTVWGTK 595 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Nov 8, 2007 5:59 PM Number of letters in database: 1,944,094,812 Number of sequences in database: 5,622,235 Lambda K H 0.320 0.134 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 5622235 Number of Hits to DB: 425696961 Number of extensions: 17860109 Number of successful extensions: 31929 Number of sequences better than 10: 1 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 31975 Number of HSP's successfully gapped: 3 Length of database: 1944094812 T: 11 A: 40 X1: 16 (7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits)