toolId = IQTREE_XSEDE_EXPANSE
#bootstrap_type_ = bb
#write_boottrees1_  = 1
#num_bootreps_ = 1000
sequence_type_ = AA
#specify patterns is required.
specify_numpatterns_ 1800
#runtype required; no default.
specify_runtype_ = 2
#deprecated parameter: specify_numparts_ = 3
#specify_seed_ = 1343696351
#partition_type2_ is a required paramter, no default
partition_type_ = -p
#specify_model_ = TESTMERGE
specify_prefix_ = iqtreeAnalysis