#!/bin/sh
# This is for running on COMET

source $HOME/.bashrc

echo "CIPRES_THREADSPP=$CIPRES_THREADSPP"
echo "CIPRES_NP=$CIPRES_NP"
echo "running:"

export MODULEPATH=/share/apps/compute/modulefiles/applications:$MODULEPATH
module load GenomeAnalysisTK/3.5


cmdline="$*"
echo $cmdline
$cmdline